HHsearch alignment for GI: 254780707 and conserved domain: PRK10682
>PRK10682 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Provisional.
Probab=96.44 E-value=0.055 Score=29.80 Aligned_cols=116 Identities=17% Similarity=0.124 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-ECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH-HHHHHHCCCCC
Q ss_conf 248999999999999831420137679998-0342589999999999987798079998157620578-98852101335
Q gi|254780707|r 2 RFFFVVLMCFVVLEVYCGTGTFARNRIRIA-GSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGL-KEFCRGIGDDT 79 (346)
Q Consensus 2 k~~~~~~~~~~~l~~~~~~~~~a~~~I~i~-GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi-~~~~~G~~~~~ 79 (346)
T Consensus 6 ~~~~~~l~~~~~~~~~~~~~aa~~~~Lnv~nW~~Yi~---p~~i~~Feket-GikV-~~~~~~snee~~akl~ag~--~g 78 (370)
T PRK10682 6 KKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA---PDTVANFEKET-GIKV-VYDVFDSNEVLEGKLMAGS--TG 78 (370)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCC---HHHHHHHHHHH-CCEE-EEEECCCHHHHHHHHHCCC--CC
T ss_conf 8899999999999985205664279799981676579---77999999997-9889-9995499899999996699--99
Q ss_pred CCEEECCCCCCH-------------HHHHHH-----------HHCCCCCCEEEEEECCCCEEEECCCCC
Q ss_conf 301213320247-------------678767-----------624878724666521541255416665
Q gi|254780707|r 80 IDIVNSSRKITQ-------------NELDEC-----------KKHGVSDIQEVTIGHDGILLVSDRDMV 124 (346)
Q Consensus 80 ~dig~ssr~l~~-------------~E~~~~-----------~~~~~~~~~~~~v~~d~i~i~~n~~~~ 124 (346)
T Consensus 79 yDvv~ps~~~v~~~~~~gll~pLD~sklpN~~ni~p~~~~~~~~~dpg~~YsVPy~wGt~GI~Yn~d~v 147 (370)
T PRK10682 79 FDLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKV 147 (370)
T ss_pred CCEEEECHHHHHHHHHCCCCCCCCHHHCCCHHHCCHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCC
T ss_conf 988997779999999769846477000867444299988410036999759988884225999976544