HHsearch alignment for GI: 254780707 and conserved domain: PRK10974
>PRK10974 glycerol-3-phosphate transporter periplasmic binding protein; Provisional.
Probab=97.45 E-value=0.0066 Score=34.95 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=59.4
Q ss_pred HHHHHHHHCCCCCCCCEEEE--EECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH----HCCCCCCCEEE
Q ss_conf 99999983142013767999--8034258999999999998779807999815762057898852----10133530121
Q gi|254780707|r 11 FVVLEVYCGTGTFARNRIRI--AGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCR----GIGDDTIDIVN 84 (346)
Q Consensus 11 ~~~l~~~~~~~~~a~~~I~i--~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~----G~~~~~~dig~ 84 (346)
T Consensus 12 ~~~~~~~~~~~a~a~~eI~fWh~~~g~~~~~l~~lv~eFn~~~p~i~V~~~~~g~y~~~l~k~~aa~~ag~---~Pdv~~ 88 (439)
T PRK10974 12 GLALGLALSGNAQAVTEIPFWHSMEGELGKEVDSLAQRFNASQPDYKIVPVYKGNYEQNLAAGIAAFRSGN---APAILQ 88 (439)
T ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCC---CCEEEE
T ss_conf 99999984455679769999358998157999999999998785918999865899999999999872699---982999
Q ss_pred CCC-------------CCCH-----------HHH-HHHH----HCCCCCCEEEEEECCCCEEEECCCCC
Q ss_conf 332-------------0247-----------678-7676----24878724666521541255416665
Q gi|254780707|r 85 SSR-------------KITQ-----------NEL-DECK----KHGVSDIQEVTIGHDGILLVSDRDMV 124 (346)
Q Consensus 85 ssr-------------~l~~-----------~E~-~~~~----~~~~~~~~~~~v~~d~i~i~~n~~~~ 124 (346)
T Consensus 89 ~~~~~~~~~~~~~~l~pl~~~~~~~~~~~d~~~~~p~~~~~~~~~~~Gk~yglP~~~s~~vlyYNkdlf 157 (439)
T PRK10974 89 VYEVGTATMMASKAIKPVYDVFKDAGIPFDESQFVPTVAGYYSDAKTGHLLSQPFNSSTPVLYYNKDAF 157 (439)
T ss_pred ECCCCHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEHHHH
T ss_conf 874309999976997771798972587878565327888761257798699983037765999858999