HHsearch alignment for GI: 254780707 and conserved domain: PRK12683
>PRK12683 transcriptional regulator CysB-like protein; Reviewed.
Probab=97.98 E-value=0.00047 Score=41.32 Aligned_cols=203 Identities=13% Similarity=0.073 Sum_probs=117.2
Q ss_pred CCCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCC
Q ss_conf 1376799980342589-999999999987798079998157620578988521013353012133202476787676248
Q gi|254780707|r 23 FARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHG 101 (346)
Q Consensus 23 ~a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~ 101 (346)
T Consensus 90 ~~~G~l~Ig~~~~~~~~~lp~~l~~f~~~~P~v~i~-l~~~~~~~~~~~L~~g~----~Dl~i~~~~~~~~--------- 155 (308)
T PRK12683 90 RDSGRLTVATTHTQARYALPKVVRQFTEVFPKVHLA-LRQGSPQEIAEMLLNGE----ADIGIATEALDRE--------- 155 (308)
T ss_pred CCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHCCC----CCEEECCCCCCCC---------
T ss_conf 777624200132011201684668999878996699-96078699999997799----7788066677888---------
Q ss_pred CCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHH
Q ss_conf 78724666521541255416665456888888876410255555323673023231001112245035448854235789
Q gi|254780707|r 102 VSDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREV 181 (346)
Q Consensus 102 ~~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~ 181 (346)
T Consensus 156 -~~l~~~~l~~~~~~lv~~~~hpla~~~----------------------~v~l~dl----~~~p--~I~~~~~~~~r~~ 206 (308)
T PRK12683 156 -PDLVSFPYYSWHHVVVVPKGHPLTGRE----------------------NLTLEAL----AEYP--IITYDQGFTGRSH 206 (308)
T ss_pred -CCCEEEEECCCCEEEEECCCCCCCCCC----------------------CCCHHHH----CCCC--EEECCCCCCHHHH
T ss_conf -771687612451589846999533699----------------------9999998----5999--8961899829999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCC-CC
Q ss_conf 99885134555654101111101366000134443102466402116623677763101532100133200110011-10
Q gi|254780707|r 182 LEKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNAD-VL 260 (346)
Q Consensus 182 F~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~-~~ 260 (346)
T Consensus 207 i~~~~~~~g~~p-----------------------------~~~~e~~~~~~i~~~V~-~g~Gi~ilp~~~~~~~~~~~l 256 (308)
T PRK12683 207 IDQAFAEAGAVP-----------------------------DIVLTALDADVIKTYVE-LGMGVGIVAAMAYDPQRDTGL 256 (308)
T ss_pred HHHHHHHCCCCC-----------------------------CEEEEECCHHHHHHHHH-HCCCHHHHHHHHHHHHHCCCE
T ss_conf 999999779998-----------------------------57999998999999999-798470789999878860997
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCH
Q ss_conf 013445767895560279875036789997078856688999999997498
Q gi|254780707|r 261 KLVPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSD 311 (346)
Q Consensus 261 ~~~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~ 311 (346)
T Consensus 257 v~l~------------~~~~~~~~~~~i~~rk-~~~Ls~~a~~Fie~l~~~ 294 (308)
T PRK12683 257 VALD------------TQHLFEANTTRVALRR-GAYLRGYAYRFIEMFAPH 294 (308)
T ss_pred EEEE------------CCCCCCCCEEEEEECC-CCCCCHHHHHHHHHHHHH
T ss_conf 9998------------9788766179999909-685799999999998886