HHsearch results for GI: 254780707 and protein with PDBid: 1q35_A

>1q35_A Iron binding protein FBPA; metal binding protein; 1.20A {Mannheimia haemolytica} SCOP: c.94.1.1 PDB: 1si0_A 1si1_A
Probab=96.18  E-value=0.043  Score=29.22  Aligned_cols=94  Identities=10%  Similarity=0.027  Sum_probs=46.6

Q ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHH-------
Q ss_conf             6799980342589999999999987798079998157620578988521013353012133202476787676-------
Q gi|254780707|r   26 NRIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECK-------   98 (346)
Q Consensus        26 ~~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~-------   98 (346)
                      +.|+|--+. ..-+++.+.+.|++++ |++|..+ ..+++ -+..+.+...+...|+..++-..-...+....       
T Consensus         2 ~el~vYt~~-~~~~~~~li~~Fek~t-GIkV~~~-~~~~~-~~~kl~ae~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~   77 (320)
T 1q35_A            2 NEVNVYSYR-QPYLIEPMLKNFEKDT-GIKVNII-FADKG-LVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDS   77 (320)
T ss_dssp             CEEEEEESS-CGGGTHHHHHHHHHHH-CCEEEEE-ECC-C-CHHHHHHHGGGCCCCEEEESCHHHHHHHHHTTCBCCCCC
T ss_pred             CEEEEEECC-CHHHHHHHHHHHHHHH-CCEEEEE-ECCHH-HHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCH
T ss_conf             758998798-8768999999998866-9789999-69989-999999647999988899797899999885275433421


Q ss_pred             ---------HCCCCCCEEEEEECCCCEEEECCCC
Q ss_conf             ---------2487872466652154125541666
Q gi|254780707|r   99 ---------KHGVSDIQEVTIGHDGILLVSDRDM  123 (346)
Q Consensus        99 ---------~~~~~~~~~~~v~~d~i~i~~n~~~  123 (346)
                               .........++......++.+|.+-
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~  111 (320)
T 1q35_A           78 KVLEKNIPAQFRDSNDQWFGLTTRARVIYTSKDR  111 (320)
T ss_dssp             HHHHHHSCGGGBCTTSSCEEEEEEEEEEEEETTT
T ss_pred             HHHHHHCHHHHCCCCCEEEEEEEEEEEEEECCCC
T ss_conf             0155534044326763376267777788850321