HHsearch results for GI: 254780707 and protein with PDBid: 2h98_A
>2h98_A HTH-type transcriptional regulator CATM; BENM, LTTR; 1.80A {Acinetobacter SP} PDB: 2h9q_A* 2f7b_A 2f7c_A* 3glb_A*
Probab=96.82 E-value=0.018 Score=31.31 Aligned_cols=203 Identities=15% Similarity=0.134 Sum_probs=116.1
Q ss_pred CCCCEEEEEECCH-HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCC
Q ss_conf 1376799980342-589999999999987798079998157620578988521013353012133202476787676248
Q gi|254780707|r 23 FARNRIRIAGSST-LFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHG 101 (346)
Q Consensus 23 ~a~~~I~i~GSst-~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~ 101 (346)
....+|+|+.+.+ ...++..+...|.+.+|++.+. +....+..-++.+.+|. +|||....+....
T Consensus 87 ~~~~~l~i~~~~~~~~~~l~~~l~~~~~~~P~v~i~-i~~~~~~~~~~~l~~~~----~Di~i~~~~~~~~--------- 152 (313)
T 2h98_A 87 TVSQTLRIGYVSSLLYGLLPEIIYLFRQQNPEIHIE-LIECGTKDQINALKQGK----IDLGFGRLKITDP--------- 152 (313)
T ss_dssp --CCEEEEEECGGGGGTTHHHHHHHHHHHCTTSEEE-EEECCHHHHHHHHHHTS----CSEEEESSCCCCT---------
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEE-EECCCCHHHHHHHHCCC----CCCEEEECCCCCC---------
T ss_conf 566239998610567889999999998629933432-11278278999974215----5513530356673---------
Q ss_pred CCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHH
Q ss_conf 78724666521541255416665456888888876410255555323673023231001112245035448854235789
Q gi|254780707|r 102 VSDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREV 181 (346)
Q Consensus 102 ~~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~ 181 (346)
.+...++..+.+++++..+.+..... .+...+.+ +.+.+...+.+...++....
T Consensus 153 --~~~~~~l~~~~~~~~~~~~~~l~~~~--------------------~~~i~~~~----l~~~~~i~~~~~~~~~~~~~ 206 (313)
T 2h98_A 153 --AIRRIMLHKEQLKLAIHKHHHLNQFA--------------------ATGVHLSQ----IIDEPMLLYPVSQKPNFATF 206 (313)
T ss_dssp --TEEEEEEEEEEEEEEEETTSGGGGGT--------------------TSCBCGGG----GTTSCEEECCCSSSSSHHHH
T ss_pred --HHHHHHHHHHHHEEECCCCCHHHHCC--------------------CCCCCHHH----HHCCCEEEEECCCCCCCHHH
T ss_conf --13455433322034204776244335--------------------78758899----80898798414567641025
Q ss_pred HHHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 99885134555654101111101366000134443102466402116623677763101532100133200110011100
Q gi|254780707|r 182 LEKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLK 261 (346)
Q Consensus 182 F~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~ 261 (346)
+.+.....+.. ...+...++...+.+.+.. ..+++.++..........+.
T Consensus 207 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~v~~-g~gi~~lP~~~~~~~~~~l~ 256 (313)
T 2h98_A 207 IQSLFTELGLV-----------------------------PSKLTEIREIQLALGLVAA-GEGVCIVPASAMDIGVKNLL 256 (313)
T ss_dssp HHHHHHHTTCC-----------------------------CSCEEECSCHHHHHHHHHT-TSCBEEEEGGGGGSCCTTEE
T ss_pred HHHHHHHCCCC-----------------------------CCEEECCCCHHHHHHHHHH-CCEEEEEHHHHHHHHCCCEE
T ss_conf 66778863898-----------------------------7400134989999999994-99699713889844309989
Q ss_pred CCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 134457678955602798750367899970788566889999999974
Q gi|254780707|r 262 LVPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSV 309 (346)
Q Consensus 262 ~~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~l 309 (346)
.+++. + -++.++++++..+.. ..+.++.|++++-
T Consensus 257 ~~pl~----------~--~~~~~~i~l~~r~~~--~~~~~~~f~~~~~ 290 (313)
T 2h98_A 257 YIPIL----------D--DDAYSPISLAVRNMD--HSNYIPKILACVQ 290 (313)
T ss_dssp EEEBC----------S--TTCEEEEEEEEETTC--CCTHHHHHHHHHH
T ss_pred EEECC----------C--CCCCEEEEEEEECCC--CCHHHHHHHHHHH
T ss_conf 99878----------9--986007999998998--8979999999999