HHsearch results for GI: 254780707 and protein with PDBid: 2h9b_A
>2h9b_A HTH-type transcriptional regulator BENM; LTTR, transcriptional activator, LYSR-type transcriptional regulator; 1.80A {Acinetobacter SP} PDB: 2h99_A 3k1m_A 3k1n_A 3k1p_A 2f7a_A* 2f6p_A 2f78_A 2f6g_A* 2f8d_A 2f97_A*
Probab=97.51 E-value=0.0033 Score=35.38 Aligned_cols=203 Identities=13% Similarity=0.126 Sum_probs=119.5
Q ss_pred CCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf 376799980342589-9999999999877980799981576205789885210133530121332024767876762487
Q gi|254780707|r 24 ARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGV 102 (346)
Q Consensus 24 a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~ 102 (346)
....++|+...++.. ++..+...|.+.+|++.+. +....+...+..+.+|. +||+.+..+..+.
T Consensus 88 ~~~~l~i~~~~~~~~~~l~~~l~~~~~~~p~v~l~-~~~~~~~~l~~~l~~g~----~Dlai~~~~~~~~---------- 152 (312)
T 2h9b_A 88 VEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIE-LYEMGTKAQTEALKEGR----IDAGFGRLKISDP---------- 152 (312)
T ss_dssp -CCEEEEEECGGGGGTTHHHHHHHHHHTCTTCEEE-EEECCHHHHHHHHHTTS----CSEEEESSCCCCT----------
T ss_pred CCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEE-ECCCCCHHHHHHHHCCC----CCEEEEECCCCCC----------
T ss_conf 57459997535668999999999999978997785-31355077999997699----6479960688987----------
Q ss_pred CCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH
Q ss_conf 87246665215412554166654568888888764102555553236730232310011122450354488542357899
Q gi|254780707|r 103 SDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVL 182 (346)
Q Consensus 103 ~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F 182 (346)
.+...++..+..+++.+...+..... ....+|.|+ .+.|...+.+...++.+..+
T Consensus 153 -~~~~~~l~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~dl----~~~~~i~~~~~~~~~~~~~~ 207 (312)
T 2h9b_A 153 -AIKHSLLRNERLMVAVHASHPLNQMK--------------------DKGVHLNDL----IDEKILLYPSSPKPNFSTHV 207 (312)
T ss_dssp -TEEEEEEEEEEEEEEEETTSGGGGGT--------------------TTCBCGGGS----TTSEEEECCCSSSSSHHHHH
T ss_pred -CCEEEEECCCEEEEEECCCCHHHHCC--------------------CCCCHHHHH----CCCCEEEECCCCCCCHHHHH
T ss_conf -61799811305999963788466533--------------------432025564----37977984287665124666
Q ss_pred HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf 98851345556541011111013660001344431024664021166236777631015321001332001100111001
Q gi|254780707|r 183 EKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKL 262 (346)
Q Consensus 183 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~ 262 (346)
.......+... ...-..++...+.+.+... .+++.++..........+..
T Consensus 208 ~~~~~~~~~~~-----------------------------~~~~~~~s~~~~~~~v~~g-~gi~ilP~~~~~~~~~~l~~ 257 (312)
T 2h9b_A 208 MNIFSDHGLEP-----------------------------TKINEVREVQLALGLVAAG-EGISLVPASTQSIQLFNLSY 257 (312)
T ss_dssp HHHHHTTTCCC-----------------------------SEEEECSSHHHHHHHHHTT-SCBEEEEGGGGGBCCTTEEE
T ss_pred HHHHHHCCCCC-----------------------------CEEEECCCHHHHHHHHHCC-CEEEEECHHHHHHHHCCEEE
T ss_conf 66666507886-----------------------------1465316799999999839-95999209887453388799
Q ss_pred CCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 344576789556027987503678999707885668899999999749
Q gi|254780707|r 263 VPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVS 310 (346)
Q Consensus 263 ~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls 310 (346)
+++ .+ =++.+++|++.++. ...+.++.|++++-.
T Consensus 258 ~pl----------~~--~~~~~~~~l~~r~~--~~~~~~~~~~~~~~~ 291 (312)
T 2h9b_A 258 VPL----------LD--PDAITPIYIAVRNM--EESTYIYSLYETIRQ 291 (312)
T ss_dssp EEB----------CS--TTCEEEEEEEEETT--CCCHHHHHHHHHHHH
T ss_pred EEC----------CC--CCCEEEEEEEEECC--CCCHHHHHHHHHHHH
T ss_conf 985----------79--88632899999799--999899999999999