HHsearch results for GI: 254780707 and protein with PDBid: 2ql3_A
>2ql3_A Probable transcriptional regulator, LYSR family protein; APC7314, rhodococcus SP. RHA1, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Rhodococcus SP}
Probab=97.26 E-value=0.0068 Score=33.65 Aligned_cols=200 Identities=10% Similarity=0.052 Sum_probs=108.7
Q ss_pred CCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 76799980342589-99999999998779807999815762057898852101335301213320247678767624878
Q gi|254780707|r 25 RNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVS 103 (346)
Q Consensus 25 ~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~ 103 (346)
+++|+|+-+.++.. ++..+...|++.||++++. +....+..-.+.+.+|. +|+|....+....
T Consensus 4 ~G~lrIg~~~~~~~~~l~~~l~~f~~~~P~v~l~-i~~~~~~~l~~~l~~g~----~Dl~i~~~~~~~~----------- 67 (209)
T 2ql3_A 4 AGPIAVGCYPALGPTILPSMLYAFTAEYPRASVE-FREDTQNRLRTQLEGGE----LDVAIVYDLDLSP----------- 67 (209)
T ss_dssp CEEEEEEECGGGTTTTHHHHHHHHHHHCTTEEEE-EEECCHHHHHHHHHTTS----CSEEEEESSSCCT-----------
T ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHCCC----CEEEEEECCCCCC-----------
T ss_conf 2899999688999999999999999988793899-99898289998760798----3588530465420-----------
Q ss_pred CCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHH
Q ss_conf 72466652154125541666545688888887641025555532367302323100111224503544885423578999
Q gi|254780707|r 104 DIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVLE 183 (346)
Q Consensus 104 ~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F~ 183 (346)
.+...++..+...+++..+.+.... .....|.++ .+.|+..+ +..+... .+.
T Consensus 68 ~~~~~~~~~~~~~~v~~~~~~la~~---------------------~~~i~~~~l----~~~~~i~~--~~~~~~~-~~~ 119 (209)
T 2ql3_A 68 EWQTVPLMTREPMVVLGAEHPLAGV---------------------DGPVRLADL----AEHPMVLL--DAPPSTN-HAM 119 (209)
T ss_dssp TEEEEEEEEECCEEEEETTCGGGGC---------------------CSCBCGGGG----TTSCEEEE--CCTTHHH-HHH
T ss_pred CHHEECCCCCCCCCCCCCCCHHHHC---------------------CCCCCHHHH----HCCCEEEC--CCCCHHH-HHH
T ss_conf 0000001211222224689834517---------------------996679988----33985632--8995188-999
Q ss_pred HHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCC---CCC
Q ss_conf 88513455565410111110136600013444310246640211662367776310153210013320011001---110
Q gi|254780707|r 184 KKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNA---DVL 260 (346)
Q Consensus 184 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~---~~~ 260 (346)
+.....+.. ....-..++...+.+.+. ...++++++...+.... ..+
T Consensus 120 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~lv~-~g~Gi~~lp~~~~~~~~~~~~~~ 169 (209)
T 2ql3_A 120 DVCREAGFA-----------------------------PRVAYRTANFETARAFVG-RGLGWTLLLQRPRVDVTYEGLPV 169 (209)
T ss_dssp HHHHHHTCC-----------------------------CCEEEEESCHHHHHHHHH-HTSCBEEESCCCSSCBCTTSCBE
T ss_pred HHHHHCCCC-----------------------------CEEEEEECCHHHHHHHHH-CCCEEEEEEHHHHHHHHHCCCCE
T ss_conf 999974999-----------------------------506998263777899998-19959990268887786479978
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 01344576789556027987503678999707885668899999999749
Q gi|254780707|r 261 KLVPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVS 310 (346)
Q Consensus 261 ~~~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls 310 (346)
. +.|- ...-|+.+.++++.++ +....+.++.|++|+..
T Consensus 170 ~------~~pl-----~~~~~~~~~i~l~~~~-~~~~s~~~~~Fi~~l~a 207 (209)
T 2ql3_A 170 V------VKPI-----AEPKPASVAVVVAWHQ-EATLSRVARAFIRFVTA 207 (209)
T ss_dssp E------EEEB-----CSSCCCCEEEEEEEET-TCCCCHHHHHHHHHHTC
T ss_pred E------EEEC-----CCCCCCEEEEEEEECC-CCCCCHHHHHHHHHHHC
T ss_conf 9------9977-----8888744799999919-89779999999999864