HHsearch results for GI: 254780707 and protein with PDBid: 2v84_A
>2v84_A Spermidine/putrescine ABC transporter, periplasmic binding protein; polyamine binding, syphilis, lipoprotein, transport protein; HET: MES; 1.78A {Treponema pallidum}
Probab=97.08 E-value=0.011 Score=32.58 Aligned_cols=100 Identities=10% Similarity=0.096 Sum_probs=51.2
Q ss_pred HCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH-HHHHHHHCCCCCCCEEECCC---------
Q ss_conf 31420137679998034258999999999998779807999815762057-89885210133530121332---------
Q gi|254780707|r 18 CGTGTFARNRIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVG-LKEFCRGIGDDTIDIVNSSR--------- 87 (346)
Q Consensus 18 ~~~~~~a~~~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~G-i~~~~~G~~~~~~dig~ssr--------- 87 (346)
+...+..++++++---.-- +-+.+.++|+++| +++|. ++..+|..- +.++..|. ...|+...+.
T Consensus 17 ~~~~~~~~~~L~v~~W~~y--~~~~~i~~Fe~~~-gIkV~-~~~~~~~~~~~~kl~ag~--~~~Dvv~~~~~~~~~~~~~ 90 (343)
T 2v84_A 17 RGRLQTRQDVLYLYNWTYY--TPTSLIKKFEQQY-NVQVV-YDDYASNEDMFAKLSIGA--SGYDLVVPSGDFVSIMKRK 90 (343)
T ss_dssp --------CEEEEEEETTT--SCHHHHHHHHHHH-TCEEE-EEEESCHHHHHHHHSSSC--CSCSEECCBHHHHHHHHHT
T ss_pred CCCCCCCCCEEEEEECCCC--CCHHHHHHHHHHH-CCEEE-EEECCCHHHHHHHHHCCC--CCCCEEEECHHHHHHHHHC
T ss_conf 7653355898999947774--7989999999997-98899-995899899999998289--9999899798999999977
Q ss_pred ----CCCHHHHH-------HHHH---CCCCCCEEEEEECCCCEEEECCCC
Q ss_conf ----02476787-------6762---487872466652154125541666
Q gi|254780707|r 88 ----KITQNELD-------ECKK---HGVSDIQEVTIGHDGILLVSDRDM 123 (346)
Q Consensus 88 ----~l~~~E~~-------~~~~---~~~~~~~~~~v~~d~i~i~~n~~~ 123 (346)
++...... .... ........+|...+..+++||++.
T Consensus 91 gll~~ld~~~~~~~~~i~~~~~~~~~~~~g~~y~vP~~~~~~~l~YNkd~ 140 (343)
T 2v84_A 91 HLLEKIDLSKIPNVQFIKESVRARIAYDPKMEYSVPYYLGAAGIAVNKKA 140 (343)
T ss_dssp TCEECCCGGGCGGGGGBCHHHHHHCTTSTTCSSCEEEEEECCEEEEETTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEHHH
T ss_conf 99654784554105440366531331079984787888532589986311