HHsearch results for GI: 254780707 and protein with PDBid: 2z8f_A
>2z8f_A Galacto-N-biose/lacto-N-biose I transporter substrate-binding protein; ABC transporter, mucin core-1, human MILK oligosacchalide; HET: BGC GAL NAG MES; 1.65A {Bifidobacterium longum} PDB: 2z8e_A* 2z8d_A*
Probab=93.72 E-value=0.26 Score=24.81 Aligned_cols=96 Identities=13% Similarity=0.143 Sum_probs=50.8
Q ss_pred CCCCEEEEE-----ECCHHHHHHHHHHHHHHHHCCCCEEEEEEC-CCC-HHHHHH----HHHHCCCCCCCEEECCC----
Q ss_conf 137679998-----034258999999999998779807999815-762-057898----85210133530121332----
Q gi|254780707|r 23 FARNRIRIA-----GSSTLFPYSKIIAENFSEYFPEFKTPFVES-GGS-SVGLKE----FCRGIGDDTIDIVNSSR---- 87 (346)
Q Consensus 23 ~a~~~I~i~-----GSst~~P~~~~~a~~y~~~~~~~~~~~~~~-~GS-g~Gi~~----~~~G~~~~~~dig~ssr---- 87 (346)
...+.|+|. ....-.++++.+.++|+++||+++|. ++. .++ +.-... +.+|. ..||...+.
T Consensus 11 ~~~~~v~i~~~~~~~~~~~~~~~~~~i~~F~k~~p~i~V~-~~~~~~~~~d~~~kl~~~~~ag~---~pDi~~~~~~~~~ 86 (412)
T 2z8f_A 11 DDGGVVNITYMHRLPDSEGMTLVNDIVAKWNKQHPDIQVK-ATKFDGKASDMIKKLETDVKSGE---APDLAQVGYAELP 86 (412)
T ss_dssp CCCSCEEEEEEECCCCCTTSCCHHHHHHHHHHHCTTEEEE-EEECSSCGGGHHHHHHHHHHHTC---CCSEEEEEGGGHH
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE-EEEECCCHHHHHHHHHHHHHCCC---CCEEEEECHHHHH
T ss_conf 8999889999856899416899999999999888392899-99827977899999999986799---8869998918899
Q ss_pred ---------CCCHHHHHHHHH----------CCCCCCEEEEEECCCCEEEECCCC
Q ss_conf ---------024767876762----------487872466652154125541666
Q gi|254780707|r 88 ---------KITQNELDECKK----------HGVSDIQEVTIGHDGILLVSDRDM 123 (346)
Q Consensus 88 ---------~l~~~E~~~~~~----------~~~~~~~~~~v~~d~i~i~~n~~~ 123 (346)
+|++- ++.... .....+..+|...+..++.+|++.
T Consensus 87 ~~~~~g~l~dL~~~-~~~~~~~~~~~~~~~~~~dGk~y~iP~~~~~~~~~ynkd~ 140 (412)
T 2z8f_A 87 EVFTKGLLQDVTQY-AEQYKNDFASGPYSLVQVGGKAYGLPQDTGPLVYFYNKAE 140 (412)
T ss_dssp HHHHTTCBCCCHHH-HHHHGGGBCHHHHHTTEETTEECEEECBCCBEEEEEEHHH
T ss_pred HHHHCCCCCCCCHH-HHHHHHHCCHHHHHHEEECCEEEEEEEECCCCEEEEECHH
T ss_conf 99987995538154-6665764579989750899999999974376069997113