HHsearch results for GI: 254780707 and protein with PDBid: 3cvg_A
>3cvg_A Putative metal binding protein; PSI-II, NYSGXRC, periplasmic, structural genomics, protein structure initiative; 1.97A {Coccidioides immitis RS}
Probab=100.00 E-value=1.2e-33 Score=204.80 Aligned_cols=255 Identities=12% Similarity=0.035 Sum_probs=175.1
Q ss_pred CCCCEEEE-EECCHHHHHHHHHHHHHHHHCC-----CCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHH
Q ss_conf 13767999-8034258999999999998779-----80799981576205789885210133530121332024767876
Q gi|254780707|r 23 FARNRIRI-AGSSTLFPYSKIIAENFSEYFP-----EFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDE 96 (346)
Q Consensus 23 ~a~~~I~i-~GSst~~P~~~~~a~~y~~~~~-----~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~ 96 (346)
...-+|+| .||+++.+++++|+++|.++|| +++| .+..+||+.|++++.+|. +||++++|+.++.|...
T Consensus 17 ~~~~~l~i~~gs~~~~~l~~~la~aF~k~~~~~~~tgi~V-~~~~~GSg~~i~~l~~G~----~Di~~ss~~~~~~~~~~ 91 (294)
T 3cvg_A 17 HSPVQLRIGNGGAGQSGLVKELADAFIKSKVDSGSAPFKV-AWYKSDTTVTINYLKDGI----VDVGITYSPVAERISIK 91 (294)
T ss_dssp --CEEEEEEESHHHHHTHHHHHHHHHHHHHHSCC---CEE-EEEECCHHHHHHHHHTTS----CSEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE-EEEECCCHHHHHHHHCCC----CCEEEECCCHHHHHHHH
T ss_conf 8877999934773268899999999997553236898389-999688299999986589----84686317023689997
Q ss_pred HHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCC
Q ss_conf 76248787246665215412554166654568888888764102555553236730232310011122450354488542
Q gi|254780707|r 97 CKKHGVSDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKH 176 (346)
Q Consensus 97 ~~~~~~~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~S 176 (346)
.. . ......++.++..++++..++..+++..++... +.+++++|.++++ |+.+|.++.|++.|
T Consensus 92 ~~--~--~~~~~~~~~~~~~viv~~~~~~~~~~~~~~~~~-----------~~~~~~~w~~~g~--~~~~i~~~~r~~~s 154 (294)
T 3cvg_A 92 HG--I--SESPSYYAFRDHFMLIGPPSNPAKLSGDSDIAD-----------MFSKMHDAAEAGN--TKPPVRFLSRYDKS 154 (294)
T ss_dssp TT--S--BCSSCEEEEEEEEEEEECTTCTTCCCTTSCHHH-----------HHHHHHHHHHHCC--SSSCCCEEECCSSS
T ss_pred CC--C--CCCCEEECCCCCEEEECCCCCHHHCCCHHHHHH-----------HHHHHHHHHHCCC--CCCCCEEEECCCCC
T ss_conf 38--7--865236325672999889886543233245667-----------7655323343147--65561355356666
Q ss_pred CHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHC
Q ss_conf 35789998851345556541011111013660001344431024664021166236777631015321001332001100
Q gi|254780707|r 177 GTREVLEKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNN 256 (346)
Q Consensus 177 GT~~~F~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~ 256 (346)
||+..|.+.+............ ...... ....+...+......+||........
T Consensus 155 gt~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~- 208 (294)
T 3cvg_A 155 ATNIKEAELWLSIGQVPWATAY----------------------STWYHQ---YITFPIQALTAAILLREYTITDYGTY- 208 (294)
T ss_dssp HHHHHHHHHHHHTTCCTTSSSC----------------------CTTEEE---CCSCHHHHHHHHHHTTCEEEEEHHHH-
T ss_pred CHHHHHHHHHHHCCCCCCCCCC----------------------CCCHHC---CCCCHHHHHHCCCCCCEEEEEEEEEH-
T ss_conf 3468899999861778643334----------------------422110---45411344320344404897421100-
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHH-HCCCCCHHHHCC------CCCCC
Q ss_conf 11100134457678955602798750367899970788566889999999974987-405220277559------63489
Q gi|254780707|r 257 ADVLKLVPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDE-MMAPDSQLFQYG------LIPIS 329 (346)
Q Consensus 257 ~~~~~~~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~-~~~~~~~~~~~G------yvPLp 329 (346)
........+.+.++.+++..+.|||.||+++++.+... ..++.|+|++|++|+| ||. ++++.| |.|.|
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~v~i~k~~k-n~~~Ak~FidfllS~E~GQ~---Ii~~yg~~g~~~f~P~~ 283 (294)
T 3cvg_A 209 -LSIPRGLRDQMVIYKKGTNDADDPLLNPAHLLVGARAK-NAEMAKEFAKWLVSKEGGQK---VIEGFKKDGQQLYSPAP 283 (294)
T ss_dssp -TTSCHHHHTTCEEEEECCSCTTCTTEEEEEEEEBSSCS-SHHHHHHHHHHHHSTTTHHH---HHHTCEETTEECSEECC
T ss_pred -HHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCC-CHHHHHHHHHHHCCCHHHHH---HHHHHCCCCEEEEEECC
T ss_conf -13321356650132125567886402146899968988-94999999999849398999---99982518845465378
Q ss_pred H
Q ss_conf 9
Q gi|254780707|r 330 N 330 (346)
Q Consensus 330 ~ 330 (346)
-
T Consensus 284 ~ 284 (294)
T 3cvg_A 284 Y 284 (294)
T ss_dssp C
T ss_pred C
T ss_conf 6