HHsearch results for GI: 254780707 and protein with PDBid: 3jv9_A

>3jv9_A OXYR, transcriptional regulator, LYSR family; LYSR-type transcriptional regulator, LTTR, redox, structural genomics, OPPF; 2.39A {Neisseria meningitidis}
Probab=97.24  E-value=0.0039  Score=34.97  Aligned_cols=86  Identities=9%  Similarity=0.103  Sum_probs=65.9

Q ss_pred             CCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCC
Q ss_conf             76799980342589-99999999998779807999815762057898852101335301213320247678767624878
Q gi|254780707|r   25 RNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVS  103 (346)
Q Consensus        25 ~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~  103 (346)
                      +++|+|+-+.++.+ ++..+-..|++.||++++.+ ....+..=++.+.+|.    +|++....+....           
T Consensus         3 ~G~lrIG~~~s~~~~~lp~~l~~f~~~~P~v~l~i-~~~~~~~l~~~l~~g~----~D~~i~~~~~~~~-----------   66 (219)
T 3jv9_A            3 EGAFKLGLIFTVAPYLLPKLIVSLRRTAPKMPLML-EENYTHTLTESLKRGD----VDAIIVAEPFQEP-----------   66 (219)
T ss_dssp             CCCEEEEEETTTHHHHHHHHHHHHHHHSTTCCEEE-EEECHHHHHHHHHHTS----SSEEEEESSCCCT-----------
T ss_pred             CEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEE-EECCCHHHHHHHHCCC----EEEEEECCCCCCC-----------
T ss_conf             02899997778899999999999999888928999-9887377776561695----8887502687778-----------


Q ss_pred             CCEEEEEECCCCEEEECCCCCCC
Q ss_conf             72466652154125541666545
Q gi|254780707|r  104 DIQEVTIGHDGILLVSDRDMVSV  126 (346)
Q Consensus       104 ~~~~~~v~~d~i~i~~n~~~~~~  126 (346)
                      .+...++..+.++++..++.+..
T Consensus        67 ~~~~~~l~~e~~~lv~~~~~~l~   89 (219)
T 3jv9_A           67 GIVTEPLYDEPFFVIVPKGHSFE   89 (219)
T ss_dssp             TEEEEEEEEEEEEEEEETTCGGG
T ss_pred             CEEEEEECCCCEEEEEECCCCCC
T ss_conf             74898503310899975664212