HHsearch results for GI: 254780707 and protein with PDBid: 3jv9_A
>3jv9_A OXYR, transcriptional regulator, LYSR family; LYSR-type transcriptional regulator, LTTR, redox, structural genomics, OPPF; 2.39A {Neisseria meningitidis}
Probab=97.24 E-value=0.0039 Score=34.97 Aligned_cols=86 Identities=9% Similarity=0.103 Sum_probs=65.9
Q ss_pred CCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 76799980342589-99999999998779807999815762057898852101335301213320247678767624878
Q gi|254780707|r 25 RNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVS 103 (346)
Q Consensus 25 ~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~ 103 (346)
+++|+|+-+.++.+ ++..+-..|++.||++++.+ ....+..=++.+.+|. +|++....+....
T Consensus 3 ~G~lrIG~~~s~~~~~lp~~l~~f~~~~P~v~l~i-~~~~~~~l~~~l~~g~----~D~~i~~~~~~~~----------- 66 (219)
T 3jv9_A 3 EGAFKLGLIFTVAPYLLPKLIVSLRRTAPKMPLML-EENYTHTLTESLKRGD----VDAIIVAEPFQEP----------- 66 (219)
T ss_dssp CCCEEEEEETTTHHHHHHHHHHHHHHHSTTCCEEE-EEECHHHHHHHHHHTS----SSEEEEESSCCCT-----------
T ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEE-EECCCHHHHHHHHCCC----EEEEEECCCCCCC-----------
T ss_conf 02899997778899999999999999888928999-9887377776561695----8887502687778-----------
Q ss_pred CCEEEEEECCCCEEEECCCCCCC
Q ss_conf 72466652154125541666545
Q gi|254780707|r 104 DIQEVTIGHDGILLVSDRDMVSV 126 (346)
Q Consensus 104 ~~~~~~v~~d~i~i~~n~~~~~~ 126 (346)
.+...++..+.++++..++.+..
T Consensus 67 ~~~~~~l~~e~~~lv~~~~~~l~ 89 (219)
T 3jv9_A 67 GIVTEPLYDEPFFVIVPKGHSFE 89 (219)
T ss_dssp TEEEEEEEEEEEEEEEETTCGGG
T ss_pred CEEEEEECCCCEEEEEECCCCCC
T ss_conf 74898503310899975664212