HHSEARCH alignment of GI: 254780707 and SCOP domain: d1atga_

Alignment
>d1atga_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Azotobacter vinelandii [TaxId: 354]}
Probab=99.38  E-value=2.3e-11  Score=79.46  Aligned_cols=230  Identities=12%  Similarity=0.098  Sum_probs=117.6

Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCE
Q ss_conf             79998034258999999999998779807999815762057898852101335301213320247678767624878724
Q gi|254780707|r   27 RIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVSDIQ  106 (346)
Q Consensus        27 ~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~~~~  106 (346)
                      .|++.+++++.++++.+++.|+++++ +++ .+..+||+..++++..|.   ..|+-.+..+.........  .......
T Consensus         1 el~v~~~~~~~~~~~~l~~~Fe~~tG-i~V-~~~~g~s~~l~~~i~~g~---~~dv~~~~~~~~~~~~~~~--~~~~~~~   73 (231)
T d1atga_           1 ELKVVTATNFLGTLEQLAGQFAKQTG-HAV-VISSGSSGPVYAQIVNGA---PYNVFFSADEKSPEKLDNQ--GFALPGS   73 (231)
T ss_dssp             CEEEEEEGGGHHHHHHHHHHHHHHHC-CCE-EEEEECHHHHHHHHHTTC---CCSEEECSSSHHHHHHHHT--TCBCTTC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHC-CEE-EEEECCHHHHHHHHHCCC---CCCEEEECCHHHHHHHHHH--CCCCCCC
T ss_conf             97999950469999999999999649-789-999777699999998289---8866875104666665640--1322231


Q ss_pred             EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH
Q ss_conf             66652154125541666545688888887641025555532367302323100111224503544885423578999885
Q gi|254780707|r  107 EVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVLEKKV  186 (346)
Q Consensus       107 ~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F~~~v  186 (346)
                      ........+++..+...+                          ..++|.++..  |......+..+..+++-..+....
T Consensus        74 ~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~--~~~~~i~~~~p~~~~~g~~~~~~~  125 (231)
T d1atga_          74 RFTYAIGKLVLWSAKPGL--------------------------VDNQGKVLAG--NGWRHIAISNPQIAPYGLAGTQVL  125 (231)
T ss_dssp             CEEEEECCEEEEESSTTT--------------------------SCTTSGGGGS--SSCSCEEEECTTTCHHHHHHHHHH
T ss_pred             CCEECCCCEEEECCCCCC--------------------------CCCCHHHHCC--CCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             000014520000035777--------------------------8976888357--435779995676561468998765


Q ss_pred             CCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf             13455565410111110136600013444310246640211662367776310153210013320011001110013445
Q gi|254780707|r  187 LQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPID  266 (346)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~~  266 (346)
                      ......     ...        ...           ..+.......+....+......+++...............  ..
T Consensus       126 ~~~~~~-----~~~--------~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~  179 (231)
T d1atga_         126 THLGLL-----DKL--------TAQ-----------ERIVEANSVGQAHSQTASGAADLGFVALAQIIQAAAKIPG--SH  179 (231)
T ss_dssp             HHTTCH-----HHH--------HHT-----------TCEEEESSHHHHHHHHHTTSSSEEEEEGGGTCCTTSCCSS--EE
T ss_pred             HHHHHH-----HHH--------CCC-----------CEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC--EE
T ss_conf             400123-----333--------221-----------0355225430456776516404456677899986334664--24


Q ss_pred             CCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCCCCC
Q ss_conf             767895560279875036789997078856688999999997498740522027755963489
Q gi|254780707|r  267 GIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLIPIS  329 (346)
Q Consensus       267 ~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~GyvPLp  329 (346)
                      .+.|     .++..|+.+++-+ ++.  ....+..++|++|++|+++|.   ++.+.||. +|
T Consensus       180 ~~~~-----~~~~~~~~~~~~i-~~~--a~~~~~A~~Fidfl~S~e~Q~---i~~~~Gf~-~P  230 (231)
T d1atga_         180 WFPP-----ANYYEPIVQQAVI-TKS--TAEKANAEQFMSWMKGPKAVA---IIKAAGYV-LP  230 (231)
T ss_dssp             ECCC-----GGGSCCCEEEEEE-BTT--CSCHHHHHHHHHHTTSHHHHH---HHHHTTCB-CC
T ss_pred             EEEC-----CCCCEEEEEEEEE-ECC--CCCHHHHHHHHHHHCCHHHHH---HHHHHCCC-CC
T ss_conf             6544-----8886366666999-889--999899999999978999999---99984898-99


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Molybdate-binding protein, ModA
species: Azotobacter vinelandii [TaxId: 354]