HHSEARCH alignment of GI: 254780707 and SCOP domain: d1nnfa_

Alignment

Probab=97.85  E-value=0.00028  Score=40.08  Aligned_cols=48  Identities=15%  Similarity=0.108  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEC
Q ss_conf             58999999999998779807999815762057898852101335301213
Q gi|254780707|r   36 LFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNS   85 (346)
Q Consensus        36 ~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~s   85 (346)
                      ...+++.+.+.|++++ |++|. +...+|+.-+.++.+...+..+|+..+
T Consensus         9 ~~~~~~~l~~~Fek~t-GIkV~-~~~~~~~~~~~kl~ae~~~~~~DV~~~   56 (308)
T d1nnfa_           9 QKEAATAVAKAFEQET-GIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT   56 (308)
T ss_dssp             CHHHHHHHHHHHHHHS-CCCEE-EEECCHHHHHHHHHHHGGGCCCSEEEE
T ss_pred             CHHHHHHHHHHHHHHH-CCEEE-EEECCHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             8779999999998855-98799-997981999999997468999888997

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Haemophilus influenzae [TaxId: 727]