HHSEARCH alignment of GI: 254780707 and SCOP domain: d1pc3a_

Alignment
>d1pc3a_ c.94.1.1 (A:) Phosphate-binding protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=361.83  Aligned_cols=296  Identities=15%  Similarity=0.160  Sum_probs=228.3

Q ss_pred             CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHH
Q ss_conf             14201376799980342589999999999987798079998157620578988521013353012133202476787676
Q gi|254780707|r   19 GTGTFARNRIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECK   98 (346)
Q Consensus        19 ~~~~~a~~~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~   98 (346)
                      .+++.+..+|+++|||+++|+++.|+++|++.||++++ +|+++|||+|+++||+|.    +|||++||+|+++|++.|.
T Consensus         3 ~~~~~~~~~l~~~GSst~~p~~~~~a~~y~~~~~~~~v-~~~~~GSg~G~~~~~~g~----~di~~ssr~l~~~E~~~~~   77 (333)
T d1pc3a_           3 TTPASSPVTLAETGSTLLYPLFNLWGPAFHERYPNVTI-TAQGTGSGAGIAQAAAGT----VNIGASDAYLSEGDMAAHK   77 (333)
T ss_dssp             CSCCSSCEEEEEEECTTTHHHHHHHHHHHHHHSTTEEE-ECCBCCHHHHHHHHHTTS----CSEEEESSCCCHHHHHHST
T ss_pred             CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEE-EEECCCCHHHHHHHHCCC----CCEEEECHHHHHHHHHHHC
T ss_conf             67778885699975366999999999999988889069-996267689999997599----9389857777667875403


Q ss_pred             HCCCCCCEEEEEECCCCEEEECCCC--CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCC
Q ss_conf             2487872466652154125541666--54568888888764102555553236730232310011122450354488542
Q gi|254780707|r   99 KHGVSDIQEVTIGHDGILLVSDRDM--VSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKH  176 (346)
Q Consensus        99 ~~~~~~~~~~~v~~d~i~i~~n~~~--~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~S  176 (346)
                           .+.++++++|++++++|.++  +..+|+.+++.+||.+++..|.    .....|.+++..+|+.+|++++|+++|
T Consensus        78 -----~~~~~~v~~~~i~v~v~~~~~~~~~~Lt~~~l~~i~~G~itnW~----~~~~~~~n~~~~~p~~~I~v~~r~~~S  148 (333)
T d1pc3a_          78 -----GLMNIALAISAQQVNYNLPGVSEHLKLNGKVLAAMYQGTIKTWD----DPQIAALNPGVNLPGTAVVPLHRSDGS  148 (333)
T ss_dssp             -----TEEEEEEEEEEEEEEECCTTCCSCCEECHHHHHHHHHTSCCBTT----CHHHHHHSTTCCCCCCBCEECEESSCC
T ss_pred             -----CEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC----CCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf             -----23530279850244454013553101289998675478755246----533333356777898613873178776


Q ss_pred             CHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCC-CCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf             357899988513455565410111110136600013444310246-6402116623677763101532100133200110
Q gi|254780707|r  177 GTREVLEKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQD-GIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKN  255 (346)
Q Consensus       177 GT~~~F~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~  255 (346)
                      ||++.|+++++...+..+.......              ...... .......+.+..+.+.+..++++|||++++|+..
T Consensus       149 GT~~~f~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~v~~~v~~~~~aIGy~~~~~~~~  214 (333)
T d1pc3a_         149 GDTFLFTQYLSKQDPEGWGKSPGFG--------------TTVDFPAVPGALGENGNGGMVTGCAETPGCVAYIGISFLDQ  214 (333)
T ss_dssp             HHHHHHHHHHHHHCTTTTTTTTCCS--------------SSCCCCCCTTCCEECHHHHHHHHHHHSTTEEEEEEGGGHHH
T ss_pred             CCHHHHHHHHHHCCCCCHHHCCCCC--------------CCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCEEEHHH
T ss_conf             3046668876511741022124766--------------43134556650331575899988745832102452130222


Q ss_pred             CCC-CC-----CCCCCCCCCCCHHHHC-----------------------CCCCCCEEEEEEEEECCCCC--CCHHHHHH
Q ss_conf             011-10-----0134457678955602-----------------------79875036789997078856--68899999
Q gi|254780707|r  256 NAD-VL-----KLVPIDGIVPSMGTIV-----------------------SGLYPISRPLLFYVKRQHFN--SVLGLREY  304 (346)
Q Consensus       256 ~~~-~~-----~~~~~~~v~p~~~~i~-----------------------~g~YPl~r~ly~yv~~~~~~--~~~~~~~F  304 (346)
                      +.. .+     .....+.+.|+.+++.                       +|+|||+|++|+|+++++.+  ..+.+++|
T Consensus       215 ~~~~~~~~a~~~~~~g~~v~Pt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~YPi~~~~y~~v~~~~~~~~~~~~v~~F  294 (333)
T d1pc3a_         215 ASQRGLGEAQLGNSSGNFLLPDAQSIQAAAAGFASKTPANQAISMIDGPAPDGYPIINYEYAIVNNRQKDAATAQTLQAF  294 (333)
T ss_dssp             HHHTTCEECEEECTTSCEECCSHHHHHHHHTTTTTCCCTTCCCCCTTCSCTTCCSCEEEEEEEEESBCSSHHHHHHHHHH
T ss_pred             CCCCCHHHEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH
T ss_conf             01222121121013466668856665443202333457874132045777896541107999995578973545999999


Q ss_pred             HHHHHCHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             9997498740522027755963489999999999996077
Q gi|254780707|r  305 VSFSVSDEMMAPDSQLFQYGLIPISNEERKSVRDSIAVGK  344 (346)
Q Consensus       305 l~~~ls~~~~~~~~~~~~~GyvPLp~~~~~~~~~~~~~~~  344 (346)
                      ++|+||+++|  +.+++++||||||++++++++++++...
T Consensus       295 l~~~ls~~gq--~~~~~~~GyvPLp~~~~~~~~~~~~~i~  332 (333)
T d1pc3a_         295 LHWAITDGNK--ASFLDQVHFQPLPPAVVKLSDALIATIS  332 (333)
T ss_dssp             HHHHTTGGGS--HHHHHHHTCBCCCHHHHHHHHHHHTTCB
T ss_pred             HHHHHCCCCH--HHHHHHCCCEECCHHHHHHHHHHHHHHC
T ss_conf             9998584147--7778858985799999999999998614


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Phosphate-binding protein
species: Mycobacterium tuberculosis [TaxId: 1773]