HHSEARCH alignment of GI: 254780707 and SCOP domain: d1q35a_

Alignment
>d1q35a_ c.94.1.1 (A:) Ferric-binding protein FbpA {Mannheimia haemolytica [TaxId: 75985]}
Probab=96.66  E-value=0.014  Score=30.63  Aligned_cols=94  Identities=11%  Similarity=0.029  Sum_probs=46.1

Q ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCH--------------
Q ss_conf             679998034258999999999998779807999815762057898852101335301213320247--------------
Q gi|254780707|r   26 NRIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQ--------------   91 (346)
Q Consensus        26 ~~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~--------------   91 (346)
                      +.|++=.+. -.-+.+.+.+.|++++ |++|. +...+++-.-+...+| .....|+........-              
T Consensus         2 ~ev~vY~~~-~~~~~~~l~~~Fek~t-GIkV~-~~~~~~~~~~kl~~e~-~~~~~Dvv~~~~~~~~~~~~~~g~~~~~~~   77 (318)
T d1q35a_           2 NEVNVYSYR-QPYLIEPMLKNFEKDT-GIKVN-IIFADKGLVDRVKQEG-ELSPADVLLTVDISRVMEIVNADLAQKIDS   77 (318)
T ss_dssp             CEEEEEESS-CGGGTHHHHHHHHHHH-CCEEE-EEECC-CCHHHHHHHG-GGCCCCEEEESCHHHHHHHHHTTCBCCCCC
T ss_pred             CEEEEEECC-CHHHHHHHHHHHHHHH-CCEEE-EEECCHHHHHHHHHCC-CCCCCCEEEECCHHHHHHHHHCCCCCCCCC
T ss_conf             859999698-8768999999998866-97899-9979889999999647-899998999788899999986375112574


Q ss_pred             HHHHHHH--HCCCCCCEEEEEECCCCEEEECCCC
Q ss_conf             6787676--2487872466652154125541666
Q gi|254780707|r   92 NELDECK--KHGVSDIQEVTIGHDGILLVSDRDM  123 (346)
Q Consensus        92 ~E~~~~~--~~~~~~~~~~~v~~d~i~i~~n~~~  123 (346)
                      ..+....  .........+++....+++++|.+-
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yN~~~  111 (318)
T d1q35a_          78 KVLEKNIPAQFRDSNDQWFGLTTRARVIYTSKDR  111 (318)
T ss_dssp             HHHHHHSCGGGBCTTSSCEEEEEEEEEEEEETTT
T ss_pred             HHHHHHCHHHHHHCCCCCCCCCCEEEEEEECHHH
T ss_conf             5544313166542132210022203788732545


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Mannheimia haemolytica [TaxId: 75985]