HHSEARCH alignment of GI: 254780707 and SCOP domain: d1sbpa_

Alignment
>d1sbpa_ c.94.1.1 (A:) Sulphate-binding protein {Salmonella typhimurium [TaxId: 90371]}
Probab=98.81  E-value=1.1e-08  Score=64.56  Aligned_cols=245  Identities=13%  Similarity=0.073  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHHHC-CCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCC------EEEEE
Q ss_conf             99999999999877-980799981576205789885210133530121332024767876762487872------46665
Q gi|254780707|r   38 PYSKIIAENFSEYF-PEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVSDI------QEVTI  110 (346)
Q Consensus        38 P~~~~~a~~y~~~~-~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~~~------~~~~v  110 (346)
                      .+.....+.|.+++ .++.+ ....+||+...+++.+|.   ..|+..+..+...+.+++.  ..+.+.      ....+
T Consensus        19 ei~~af~~~~~~~tG~~V~v-~~~~~gsg~~~~~i~~g~---~aDV~~~a~~~~~~~l~~~--gll~~~~~~~~~~~~~~   92 (309)
T d1sbpa_          19 QYNKAFSAHWKQETGDNVVI-DQSHGGSGKQATSVINGI---EADTVTLALAYDVNAIAER--GRIDKNWIKRLPDDSAP   92 (309)
T ss_dssp             HHHHHHHHHHHHHHSCEEEE-EEEESCHHHHHHHHHTTC---CCSEEEESSHHHHHHHHHT--TSSCTTGGGGSHHHHCS
T ss_pred             HHHHHHHHHHHHHCCCCEEE-EECCCCHHHHHHHHHCCC---CCCEEEECCHHHHHHHHHC--CCCCCCCHHCCCCCCEE
T ss_conf             99999999987701997799-964786599999997599---9889996778889999977--98553100003556303


Q ss_pred             ECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH----
Q ss_conf             2154125541666545688888887641025555532367302323100111224503544885423578999885----
Q gi|254780707|r  111 GHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVLEKKV----  186 (346)
Q Consensus       111 ~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F~~~v----  186 (346)
                      .....+++++..++.                         .++.|.|+..  |...+....+. .|++...+...+    
T Consensus        93 ~~~~~~~~~~~~~~~-------------------------~~~~w~dL~~--~~~k~~~~~p~-~~~~g~~~~~~~~~~~  144 (309)
T d1sbpa_          93 YTSTIVFLVRKGNPK-------------------------QIHDWNDLIK--PGVSVITPNPK-SSGGARWNYLAAWGYA  144 (309)
T ss_dssp             EEBCEEEEEETTCTT-------------------------CCCSGGGGGS--TTCCEECCCTT-TCHHHHHHHHHHHHHH
T ss_pred             EEEEEEEEECCCCCC-------------------------CCCCHHHHHC--CCCCCCCCCCC-CCCCHHHHHHHHHHHH
T ss_conf             420058997278865-------------------------6540233200--12210123344-6620389999998644


Q ss_pred             CCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf             13455565410111110136600013444310246640211662367776310153210013320011001110013445
Q gi|254780707|r  187 LQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPID  266 (346)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~~  266 (346)
                      ........  ....        +....    ... .......+........+......++..................+.
T Consensus       145 ~~~~~~~~--~~~~--------~~~~~----l~~-~~~~~~~~~~~~~~~~v~~Ge~~~~i~~~~~a~~~~~~~~~~~~~  209 (309)
T d1sbpa_         145 LHHNNNDQ--AKAE--------DFVKA----LFK-NVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFE  209 (309)
T ss_dssp             HHHTTTCH--HHHH--------HHHHH----HHH-TEEECCSSHHHHHHHHHTSCCCSEEEEEHHHHHHHHHTTTTTTEE
T ss_pred             HHCCCCHH--HHHH--------HHHHH----HHC-CCCEECCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCEE
T ss_conf             30254167--8999--------99998----751-474404686789999998597269998411999998764278537


Q ss_pred             CCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             7678955602798750367899970788566889999999974987405220277559634899999999999
Q gi|254780707|r  267 GIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLIPISNEERKSVRDS  339 (346)
Q Consensus       267 ~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~GyvPLp~~~~~~~~~~  339 (346)
                      -+.|....  -..||+....-+. +  ......+.++|++|++|+++|.   ++.+.||.|+.+++..+....
T Consensus       210 ~v~p~~~~--~~~~~v~~~~~~~-~--~~~n~~~A~~FidfllS~egQ~---i~~~~G~~P~~~~v~~~~~~~  274 (309)
T d1sbpa_         210 IVTPSESI--LAEPTVSVVDKVV-E--KKDTKAVAEAYLKYLYSPEGQE---IAAKNFYRPRDADVAKKYDDA  274 (309)
T ss_dssp             EECCSEEE--CBCCEEEECHHHH-H--HHTCHHHHHHHHHGGGSHHHHH---HHHHTTCEESCHHHHHHTGGG
T ss_pred             EECCCCCC--CCCCCEEEEEEEC-C--CCCCHHHHHHHHHHHCCHHHHH---HHHHCCCCCCCCCCCHHHHCC
T ss_conf             84688766--6667769997212-6--7888999999999963999999---999859946993304043421


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Sulphate-binding protein
species: Salmonella typhimurium [TaxId: 90371]