HHSEARCH alignment of GI: 254780707 and SCOP domain: d1y9ua_

Alignment
>d1y9ua_ c.94.1.1 (A:) Ferric-binding protein FbpA {Bordetella pertussis [TaxId: 520]}
Probab=96.25  E-value=0.019  Score=29.85  Aligned_cols=46  Identities=11%  Similarity=0.019  Sum_probs=28.2

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCC
Q ss_conf             9999999999877980799981576205789885210133530121332
Q gi|254780707|r   39 YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSR   87 (346)
Q Consensus        39 ~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr   87 (346)
                      +++.+.+.|++++ |++|..+. .+++ =+.++.+...+...|+-.++.
T Consensus        13 ~~~~li~~Fek~t-GIkV~~~~-~~~~-~~~kl~ae~~~~~~DVv~~~~   58 (318)
T d1y9ua_          13 LIQPLLDAFAKDS-GIKVNTVF-VKDG-LLERVRAEGDKSPADVLMTVD   58 (318)
T ss_dssp             GTHHHHHHHHHHH-CCEEEEEE-CSSC-HHHHHHHHGGGCCCCEEEEES
T ss_pred             HHHHHHHHHHHHH-CCEEEEEE-CCHH-HHHHHHHCCCCCCCCEEEECC
T ss_conf             8999999998866-98899997-9889-999999657899988899687


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Bordetella pertussis [TaxId: 520]