HHSEARCH alignment of GI: 254780707 and SCOP domain: d3thia_

Alignment

Probab=96.16  E-value=0.019  Score=29.79  Aligned_cols=50  Identities=8%  Similarity=-0.059  Sum_probs=31.0

Q ss_pred             CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCCCCC
Q ss_conf             79875036789997078856688999999997498740522027755963489
Q gi|254780707|r  277 SGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLIPIS  329 (346)
Q Consensus       277 ~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~GyvPLp  329 (346)
                      .+.++..-...+.+++.. ...++.++|++|++|.+.|..  .+...|..+.|
T Consensus       255 ~~~~~~~~~~~~~i~~~s-~~~e~A~~fi~fl~s~e~~~~--~~~~~g~~~~~  304 (362)
T d3thia_         255 GQDIPLFYSDVVSVNSKT-AHPELAKKLANVMASADTVEQ--ALRPQADGQYP  304 (362)
T ss_dssp             SCCCCEEEEEEEEEETTC-SCHHHHHHHHHHHHSHHHHHH--HHSCCSTTCCC
T ss_pred             CCCCCCCCCCCEEEECCC-CCHHHHHHHHHHHCCHHHHHH--HHHHCCCCCCC
T ss_conf             789875450231101676-479999999999719999999--99846887674

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Thiaminase I
species: Paenibacillus thiaminolyticus [TaxId: 49283]