RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780708|ref|YP_003065121.1| intracellular septation protein A [Candidatus Liberibacter asiaticus str. psy62] (204 letters) >d1q5xa_ c.8.7.1 (A:) Regulator of RNase E activity RraA (MenG) {Escherichia coli [TaxId: 562]} Length = 160 Score = 24.5 bits (53), Expect = 5.9 Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 25 LCNFYGEKLFFYFPMLSNLGGI 46 LC+ Y E + P+ SN GG Sbjct: 7 LCDIYQEDVNVVEPLFSNFGGR 28 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.338 0.149 0.499 Gapped Lambda K H 0.267 0.0442 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 807,333 Number of extensions: 36861 Number of successful extensions: 141 Number of sequences better than 10.0: 1 Number of HSP's gapped: 139 Number of HSP's successfully gapped: 24 Length of query: 204 Length of database: 2,407,596 Length adjustment: 81 Effective length of query: 123 Effective length of database: 1,295,466 Effective search space: 159342318 Effective search space used: 159342318 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.8 bits) S2: 51 (24.1 bits)