HHsearch alignment for GI: 254780709 and conserved domain: COG2804

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].

Probab=97.63  E-value=8e-05  Score=54.14  Aligned_cols=77  Identities=19%  Similarity=0.359  Sum_probs=57.1

Q ss_pred             CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             41231135444442478999999985226742677434-51245688999997530353212235866124542289999
Q gi|254780709|r  111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGD-TFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQA  189 (321)
Q Consensus       111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~D-tfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a  189 (321)
T Consensus       258 ~GliLvTGPTGSGKTTTLY~~L~~ln~~~~nI~TiEDPVE~~~~gI~Q~qVN~-k~gltf-------------a~~LRa~  323 (500)
T COG2804         258 QGLILVTGPTGSGKTTTLYAALSELNTPERNIITIEDPVEYQLPGINQVQVNP-KIGLTF-------------ARALRAI  323 (500)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCEEECCC-CCCCCH-------------HHHHHHH
T ss_conf             70899968999988999999999862788508984078045159851563140-359978-------------9999998


Q ss_pred             HHHCCCEEEEEC
Q ss_conf             651487599865
Q gi|254780709|r  190 QAKKVDVLIIDT  201 (321)
Q Consensus       190 ~~~~~DvvliDT  201 (321)
T Consensus       324 LRqDPDvImVGE  335 (500)
T COG2804         324 LRQDPDVIMVGE  335 (500)
T ss_pred             HCCCCCEEEEEC
T ss_conf             665998599835