HHsearch alignment for GI: 254780709 and conserved domain: COG2812

Probab=96.00  E-value=0.0037  Score=42.45  Aligned_cols=117  Identities=26%  Similarity=0.265  Sum_probs=56.3

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH-HHHHHHHHHHHHHCCCCCC----CCCCCCCHHHHH
Q ss_conf             67412311354444424789999999852267426774345124-5688999997530353212----235866124542
Q gi|254780709|r  109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRS-AAIDQLKIWADRTSADFVC----SEIGSDAAALAY  183 (321)
Q Consensus       109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~-aA~eQL~~~a~~~~v~~~~----~~~~~dp~~v~~  183 (321)
T Consensus        36 ri~hAYlfsG~RGvGKTt~Ari~AkalNC~~~-~~~ePC~~C~~Ck~I~----~g--~~~DviEiDaASn~gVddiR~i~  108 (515)
T COG2812          36 RIAHAYLFSGPRGVGKTTIARILAKALNCENG-PTAEPCGKCISCKEIN----EG--SLIDVIEIDAASNTGVDDIREII  108 (515)
T ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHH----CC--CCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             42333651377776710499999999568898-7777225316668651----48--86410113644454867999999


Q ss_pred             HHHHHHHH-HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf             28999965-148759986543332115778999989987630222343011231023352
Q gi|254780709|r  184 EAFKQAQA-KKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG  242 (321)
Q Consensus       184 ~a~~~a~~-~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g  242 (321)
T Consensus       109 e~v~y~P~~~ryKVyiIDEvHMLS~---------~afNALLKTLEEPP~hV~FIl-ATTe  158 (515)
T COG2812         109 EKVNYAPSEGRYKVYIIDEVHMLSK---------QAFNALLKTLEEPPSHVKFIL-ATTE  158 (515)
T ss_pred             HHHCCCCCCCCCEEEEEECHHHHHH---------HHHHHHHCCCCCCCCCEEEEE-ECCC
T ss_conf             8724688666641899831876437---------888887511136866748998-5388