HHsearch alignment for GI: 254780709 and conserved domain: COG3640
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning].
Probab=97.97 E-value=0.00014 Score=52.49 Aligned_cols=170 Identities=24% Similarity=0.307 Sum_probs=100.0
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHH----------------HHHHHH-----------
Q ss_conf 23113544444247899999998522-67426774345124568899----------------999753-----------
Q gi|254780709|r 113 VILVVGVNGVGKTTVIGKLSKKMSDA-GLKVMLAAGDTFRSAAIDQL----------------KIWADR----------- 164 (321)
Q Consensus 113 vil~vG~nG~GKTTT~aKLA~~~~~~-g~kV~lva~DtfR~aA~eQL----------------~~~a~~----------- 164 (321)
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp-d~nL~~~LGve~~~~~lg~~~e~~~k~~~a~~~~~~~~~fk 80 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP-DSNLPEALGVEEPMKYLGGKRELLKKRTGAEPGGPPGEMFK 80 (255)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 69996599765899999999999864895499994899-99907762999987553008999999861478999553001
Q ss_pred ------------------HCCCCCCCCC--C---CCCH-HHHHHHHHHHHHHCCCEEEEECC-CCCCCHHHHHHHHHHHH
Q ss_conf ------------------0353212235--8---6612-45422899996514875998654-33321157789999899
Q gi|254780709|r 165 ------------------TSADFVCSEI--G---SDAA-ALAYEAFKQAQAKKVDVLIIDTA-GRLHNNSILMAGIGKMI 219 (321)
Q Consensus 165 ------------------~~v~~~~~~~--~---~dp~-~v~~~a~~~a~~~~~DvvliDTA-GR~~~~~~lm~EL~ki~ 219 (321)
T Consensus 81 ~~~~~~di~~e~~~e~~~~~LLvmGkie~~GeGC~Cp~~allR~~l~~l~~~~~e~VivDtEAGiEHfg----------- 149 (255)
T COG3640 81 ENPLVSDLPDEYLVENGDIDLLVMGKIEEGGEGCACPMNALLRRLLRHLILNRYEVVIVDTEAGIEHFG----------- 149 (255)
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHC-----------
T ss_conf 375433516988500688007995255679974316278999999999751667489996334566656-----------
Q ss_pred HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC---CC--CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 8763022234301123102335225778999876435---89--769996545787069999999997698899975898
Q gi|254780709|r 220 RVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHAVA---GT--TGLIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEG 294 (321)
Q Consensus 220 ~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~F~~~~---~~--~g~I~TKlD~ta~~G~~ls~~~~~~~Pi~fig~Ge~ 294 (321)
T Consensus 150 ----Rg~~~~vD~vivVvDpS~--~sl~taeri~~L~~elg~k~i~~V~NKv~e~--e~~~~~~~~~~~~~--vlg---- 215 (255)
T COG3640 150 ----RGTIEGVDLVIVVVDPSY--KSLRTAERIKELAEELGIKRIFVVLNKVDEE--EELLRELAEELGLE--VLG---- 215 (255)
T ss_pred ----CCCCCCCCEEEEEECCCH--HHHHHHHHHHHHHHHHCCCEEEEEEEECCCH--HHHHHHHHHCCCCE--EEE----
T ss_conf ----563257877999957877--8888899999999871875499999503411--57777653227974--899----
Q ss_pred CCCCCCCCHHHHHHHHC
Q ss_conf 13255577899999872
Q gi|254780709|r 295 INDLEPFVAKDFSAVIT 311 (321)
Q Consensus 295 i~Dl~~f~~~~~~~~ll 311 (321)
T Consensus 216 ---~iP~d~~v~~~dl~ 229 (255)
T COG3640 216 ---VIPYDPEVVEADLK 229 (255)
T ss_pred ---ECCCCHHHHHCCCC
T ss_conf ---71698788742256