HHsearch alignment for GI: 254780709 and conserved domain: COG3640

>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning].
Probab=97.97  E-value=0.00014  Score=52.49  Aligned_cols=170  Identities=24%  Similarity=0.307  Sum_probs=100.0

Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHH----------------HHHHHH-----------
Q ss_conf             23113544444247899999998522-67426774345124568899----------------999753-----------
Q gi|254780709|r  113 VILVVGVNGVGKTTVIGKLSKKMSDA-GLKVMLAAGDTFRSAAIDQL----------------KIWADR-----------  164 (321)
Q Consensus       113 vil~vG~nG~GKTTT~aKLA~~~~~~-g~kV~lva~DtfR~aA~eQL----------------~~~a~~-----------  164 (321)
T Consensus         2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp-d~nL~~~LGve~~~~~lg~~~e~~~k~~~a~~~~~~~~~fk   80 (255)
T COG3640           2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP-DSNLPEALGVEEPMKYLGGKRELLKKRTGAEPGGPPGEMFK   80 (255)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             69996599765899999999999864895499994899-99907762999987553008999999861478999553001


Q ss_pred             ------------------HCCCCCCCCC--C---CCCH-HHHHHHHHHHHHHCCCEEEEECC-CCCCCHHHHHHHHHHHH
Q ss_conf             ------------------0353212235--8---6612-45422899996514875998654-33321157789999899
Q gi|254780709|r  165 ------------------TSADFVCSEI--G---SDAA-ALAYEAFKQAQAKKVDVLIIDTA-GRLHNNSILMAGIGKMI  219 (321)
Q Consensus       165 ------------------~~v~~~~~~~--~---~dp~-~v~~~a~~~a~~~~~DvvliDTA-GR~~~~~~lm~EL~ki~  219 (321)
T Consensus        81 ~~~~~~di~~e~~~e~~~~~LLvmGkie~~GeGC~Cp~~allR~~l~~l~~~~~e~VivDtEAGiEHfg-----------  149 (255)
T COG3640          81 ENPLVSDLPDEYLVENGDIDLLVMGKIEEGGEGCACPMNALLRRLLRHLILNRYEVVIVDTEAGIEHFG-----------  149 (255)
T ss_pred             CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHC-----------
T ss_conf             375433516988500688007995255679974316278999999999751667489996334566656-----------


Q ss_pred             HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC---CC--CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             8763022234301123102335225778999876435---89--769996545787069999999997698899975898
Q gi|254780709|r  220 RVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHAVA---GT--TGLIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEG  294 (321)
Q Consensus       220 ~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~F~~~~---~~--~g~I~TKlD~ta~~G~~ls~~~~~~~Pi~fig~Ge~  294 (321)
T Consensus       150 ----Rg~~~~vD~vivVvDpS~--~sl~taeri~~L~~elg~k~i~~V~NKv~e~--e~~~~~~~~~~~~~--vlg----  215 (255)
T COG3640         150 ----RGTIEGVDLVIVVVDPSY--KSLRTAERIKELAEELGIKRIFVVLNKVDEE--EELLRELAEELGLE--VLG----  215 (255)
T ss_pred             ----CCCCCCCCEEEEEECCCH--HHHHHHHHHHHHHHHHCCCEEEEEEEECCCH--HHHHHHHHHCCCCE--EEE----
T ss_conf             ----563257877999957877--8888899999999871875499999503411--57777653227974--899----


Q ss_pred             CCCCCCCCHHHHHHHHC
Q ss_conf             13255577899999872
Q gi|254780709|r  295 INDLEPFVAKDFSAVIT  311 (321)
Q Consensus       295 i~Dl~~f~~~~~~~~ll  311 (321)
T Consensus       216 ---~iP~d~~v~~~dl~  229 (255)
T COG3640         216 ---VIPYDPEVVEADLK  229 (255)
T ss_pred             ---ECCCCHHHHHCCCC
T ss_conf             ---71698788742256