HHsearch alignment for GI: 254780709 and conserved domain: KOG2004
>KOG2004 consensus.
Probab=96.81 E-value=0.058 Score=34.09 Aligned_cols=100 Identities=24% Similarity=0.281 Sum_probs=53.1
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE----------ECCCCCH---HH-HHHHHHHHHHHCC-----
Q ss_conf 366741231135444442478999999985226742677----------4345124---56-8899999753035-----
Q gi|254780709|r 107 FSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLA----------AGDTFRS---AA-IDQLKIWADRTSA----- 167 (321)
Q Consensus 107 ~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lv----------a~DtfR~---aA-~eQL~~~a~~~~v----- 167 (321)
T Consensus 434 gs~qGkIlCf~GPPGVGKTSI~kSIA~ALnRkFfRfSvGG~tDvAeIkGHRRTYVGAMPGkiIq~LK~v~t~NPliLiDE 513 (906)
T KOG2004 434 GSVQGKILCFVGPPGVGKTSIAKSIARALNRKFFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKVKTENPLILIDE 513 (906)
T ss_pred CCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEH
T ss_conf 66788379986899877321899999984874699853663427764254211001488489999986177886588532
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHHHHHC---------C---CEEEEECCCCCC
Q ss_conf -32122358661245422899996514---------8---759986543332
Q gi|254780709|r 168 -DFVCSEIGSDAAALAYEAFKQAQAKK---------V---DVLIIDTAGRLH 206 (321)
Q Consensus 168 -~~~~~~~~~dp~~v~~~a~~~a~~~~---------~---DvvliDTAGR~~ 206 (321)
T Consensus 514 vDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTAN~id 565 (906)
T KOG2004 514 VDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVID 565 (906)
T ss_pred HHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEEECCCCC
T ss_conf 2341788779868999874396535534542026642111068898536445