HHsearch alignment for GI: 254780709 and conserved domain: KOG2004

>KOG2004 consensus.
Probab=96.81  E-value=0.058  Score=34.09  Aligned_cols=100  Identities=24%  Similarity=0.281  Sum_probs=53.1

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE----------ECCCCCH---HH-HHHHHHHHHHHCC-----
Q ss_conf             366741231135444442478999999985226742677----------4345124---56-8899999753035-----
Q gi|254780709|r  107 FSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLA----------AGDTFRS---AA-IDQLKIWADRTSA-----  167 (321)
Q Consensus       107 ~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lv----------a~DtfR~---aA-~eQL~~~a~~~~v-----  167 (321)
T Consensus       434 gs~qGkIlCf~GPPGVGKTSI~kSIA~ALnRkFfRfSvGG~tDvAeIkGHRRTYVGAMPGkiIq~LK~v~t~NPliLiDE  513 (906)
T KOG2004         434 GSVQGKILCFVGPPGVGKTSIAKSIARALNRKFFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKVKTENPLILIDE  513 (906)
T ss_pred             CCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEH
T ss_conf             66788379986899877321899999984874699853663427764254211001488489999986177886588532


Q ss_pred             -CCCCCCCCCCCHHHHHHHHHHHHHHC---------C---CEEEEECCCCCC
Q ss_conf             -32122358661245422899996514---------8---759986543332
Q gi|254780709|r  168 -DFVCSEIGSDAAALAYEAFKQAQAKK---------V---DVLIIDTAGRLH  206 (321)
Q Consensus       168 -~~~~~~~~~dp~~v~~~a~~~a~~~~---------~---DvvliDTAGR~~  206 (321)
T Consensus       514 vDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTAN~id  565 (906)
T KOG2004         514 VDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVID  565 (906)
T ss_pred             HHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEEECCCCC
T ss_conf             2341788779868999874396535534542026642111068898536445