HHsearch alignment for GI: 254780709 and conserved domain: PRK00089
>PRK00089 era GTP-binding protein Era; Reviewed.
Probab=96.54 E-value=0.03 Score=36.09 Aligned_cols=152 Identities=18% Similarity=0.280 Sum_probs=82.4
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 66741231135444442478999999985226742677434512456889999975303532122358661245422899
Q gi|254780709|r 108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFK 187 (321)
Q Consensus 108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~ 187 (321)
T Consensus 5 ~~ksG~VaivG~PNvGKSTL~N~l~------~~k~siVS~----------------k~~TT-------R~~i~gi~---- 51 (296)
T PRK00089 5 KFKSGFVAIVGRPNVGKSTLLNALV------GQKISIVSP----------------KPQTT-------RHRIRGIV---- 51 (296)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHH------CCCEEEECC----------------CCCCC-------CCCEEEEE----
T ss_conf 9837999999899988899999996------896176149----------------59987-------28389999----
Q ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH--HHHHHHHHHHHCCCCEEEEEC
Q ss_conf 996514875998654333211577899998998763022234301123102335225--778999876435897699965
Q gi|254780709|r 188 QAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN--ALRQVEMFHAVAGTTGLIMTK 265 (321)
Q Consensus 188 ~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~--~~~~a~~F~~~~~~~g~I~TK 265 (321)
T Consensus 52 --~~~~~q~i~iDTpGi-~~~~~~l~~~-~~~~~~~ai--~~aDlil~viD~~~~~~~~d~~i~~~l~~~~kp~ilviNK 125 (296)
T PRK00089 52 --TEDDAQIIFVDTPGI-HKPKRALNRA-MNKAAWSSL--KDVDLVLFVVDADEKIGPGDEFILEKLKKVKTPVILVLNK 125 (296)
T ss_pred --EECCEEEEEEECCCC-CCCHHHHHHH-HHHHHHHHH--HHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEH
T ss_conf --979979999989986-6746778789-999999999--7599999998578898988999999888749988999547
Q ss_pred CCCCCCHHHHHHHHHHHCC-----CEEEEEC--CCCCCCCC
Q ss_conf 4578706999999999769-----8899975--89813255
Q gi|254780709|r 266 MDGTARGGGLIPIVVTHKI-----PVYFLGV--GEGINDLE 299 (321)
Q Consensus 266 lD~ta~~G~~ls~~~~~~~-----Pi~fig~--Ge~i~Dl~ 299 (321)
T Consensus 126 iDlv~k~-~l~~~~~~l~~~~~f~~if~iSA~~~~gi~~L~ 165 (296)
T PRK00089 126 IDLVDKE-ELLPLLEELSELMDFAEIVPISALKGDNVDELL 165 (296)
T ss_pred HHHCCHH-HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
T ss_conf 8842898-899999999853797659999677888989999