HHsearch alignment for GI: 254780709 and conserved domain: PRK03003

Probab=98.03  E-value=0.00026  Score=50.61  Aligned_cols=171  Identities=18%  Similarity=0.195  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             99999878520100121000136674123113544444247899999998522674267743451245688999997530
Q gi|254780709|r   86 YDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRT  165 (321)
Q Consensus        86 ~~l~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~  165 (321)
T Consensus       188 ~dLld~i~~~l~~~~~~--~~~~~~~~rIAIvGrPNvGKSt----L~N~llg~~r~iv------------------s~~~  243 (474)
T PRK03003        188 ADLLDAVLAALPEVPEV--GSAVGGPRRVALVGKPNVGKSS----LLNKLAGEERSVV------------------HDVA  243 (474)
T ss_pred             HHHHHHHHHHCCCCCCC--CCCCCCCCEEEEECCCCCCHHH----HHHHHHCCCCEEE------------------CCCC
T ss_conf             99999999748776644--3345776279998089987889----9999858975674------------------5899


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC-----CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             353212235866124542289999651487599865433-----321157789999899876302223430112310233
Q gi|254780709|r  166 SADFVCSEIGSDAAALAYEAFKQAQAKKVDVLIIDTAGR-----LHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDAT  240 (321)
Q Consensus       166 ~v~~~~~~~~~dp~~v~~~a~~~a~~~~~DvvliDTAGR-----~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~  240 (321)
T Consensus       244 GT-------TRDsI~~~~------~~~~~~~~liDTAGiRrk~kv~~~iE~~s----~~rtl~aI~--~advvilviDa~  304 (474)
T PRK03003        244 GT-------TVDPVDSLI------ELGGKVWRFVDTAGLRRKVGQASGHEFYA----SLRTHAAID--AAEVAVVLIDAS  304 (474)
T ss_pred             CC-------CCCCEEEEE------EECCEEEEEEECCCCCCCCCCCCCHHHHH----HHHHHHHHH--HCCEEEEEEECC
T ss_conf             85-------154405899------99998999998987663553343145899----999999987--335579998546


Q ss_pred             CCHH--HHHHHHHHHHHCCCCEEEEECCCCCCCHH-HHH------HHHHHHCCCEEEEEC--CCCCCCCC
Q ss_conf             5225--77899987643589769996545787069-999------999997698899975--89813255
Q gi|254780709|r  241 TGQN--ALRQVEMFHAVAGTTGLIMTKMDGTARGG-GLI------PIVVTHKIPVYFLGV--GEGINDLE  299 (321)
Q Consensus       241 ~gq~--~~~~a~~F~~~~~~~g~I~TKlD~ta~~G-~~l------s~~~~~~~Pi~fig~--Ge~i~Dl~  299 (321)
T Consensus       305 egit~QD~~Ia~~v~~~gk~~IivvNKwDLv~~~~~~~~~~~i~~~l~~~~~~piv~ISA~~g~~i~kL~  374 (474)
T PRK03003        305 EPLTEQDQRVLSMVIEAGRALVLAFNKWDLVDEDRRYYLEREIDRELAQVRWAPRVNISAKTGRAVQKLV  374 (474)
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHH
T ss_conf             5874999999999998099579999714416867899999999864554489856999810487989999