HHsearch alignment for GI: 254780709 and conserved domain: PRK03003

Probab=97.20  E-value=0.0095  Score=39.61  Aligned_cols=152  Identities=22%  Similarity=0.256  Sum_probs=88.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             36674123113544444247899999998522674267743451245688999997530353212235866124542289
Q gi|254780709|r  107 FSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAF  186 (321)
Q Consensus       107 ~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~  186 (321)
T Consensus        34 ~~~~lPiVaIvGRPNVGKStLFNrL~------~~~~AIV~----------------d~pGvTR-------Dr~~------   78 (474)
T PRK03003         34 ASGPLPVVAVVGRPNVGKSTLVNRIL------GRREAVVE----------------DIPGVTR-------DRVS------   78 (474)
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHH------CCCEEEEC----------------CCCCCCC-------CCEE------
T ss_conf             67999989998999988899999986------88638805----------------9899880-------8636------


Q ss_pred             HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHCCCCCCCCEEEEECCCCCCHHHH--HHHHHHHHHCCCCEEEE
Q ss_conf             99965148759986543332115778999989-9876302223430112310233522577--89998764358976999
Q gi|254780709|r  187 KQAQAKKVDVLIIDTAGRLHNNSILMAGIGKM-IRVLKRLDPHAPHSVLQVLDATTGQNAL--RQVEMFHAVAGTTGLIM  263 (321)
Q Consensus       187 ~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki-~~v~~~~~~~~p~~~~lVlda~~gq~~~--~~a~~F~~~~~~~g~I~  263 (321)
T Consensus        79 ~~~~~~~~~f~lvDTgG~~~~~~~~~~~i~~q~~~ai~-----eaD~IlfVvD~~~glt~~D~eia~~LRk~~kpviLVv  153 (474)
T PRK03003         79 YDAEWNGRRFVVQDTGGWEPDAKGLQALVAEQAEVAMR-----TADAVLFVVDATVGATATDEAVARLLRRSGKPVFLAA  153 (474)
T ss_pred             EEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH-----HCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf             89999992899997999999747899999999999998-----6999999996898988789999999875399779986


Q ss_pred             ECCCCCCCHHHHHHHHHHHCC-CEEEEEC--CCCCCCCC
Q ss_conf             654578706999999999769-8899975--89813255
Q gi|254780709|r  264 TKMDGTARGGGLIPIVVTHKI-PVYFLGV--GEGINDLE  299 (321)
Q Consensus       264 TKlD~ta~~G~~ls~~~~~~~-Pi~fig~--Ge~i~Dl~  299 (321)
T Consensus       154 NK~D~~~-~~~~~~efy~LGf~~~i~ISA~Hg~Gi~dLl  191 (474)
T PRK03003        154 NKVDSER-GEADAAALWSLGLGEPHPVSALHGRGVADLL  191 (474)
T ss_pred             ECCCCCC-HHHHHHHHHHHCCCCEEEEEHHCCCCHHHHH
T ss_conf             7556621-0234899997579986996020378979999