HHsearch alignment for GI: 254780709 and conserved domain: PRK05896

Probab=97.60  E-value=0.0012  Score=45.95  Aligned_cols=121  Identities=18%  Similarity=0.203  Sum_probs=63.2

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCC-C-EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHH
Q ss_conf             667412311354444424789999999852267-4-267743451245688999997530353212235866-1245422
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGL-K-VMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSD-AAALAYE  184 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~-k-V~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~d-p~~v~~~  184 (321)
T Consensus        35 ~RiaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~sC--------~~I~~g~h~DviEIdaasn~gIDeIRe  106 (613)
T PRK05896         35 NKLTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSVC--------ESINTNQSVDIVELDAASNNGVDEIRN  106 (613)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH--------HHHHCCCCCCEEEEECCCCCCHHHHHH
T ss_conf             997622775589984889999999999669999999988888789--------998569999868840655578899999


Q ss_pred             HHHHHH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             899996----5148759986543332115778999989987630222343011231023352257
Q gi|254780709|r  185 AFKQAQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNA  245 (321)
Q Consensus       185 a~~~a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~  245 (321)
T Consensus       107 Lie~~~~~P~~gkyKV~IIDEah~Ln~~Aa--NAL-------LKtLEEPP~~viFIL~Ttep~KL  162 (613)
T PRK05896        107 IIDNINYLPTTFKYKVYIIDEAHMLSTSAW--NAL-------LKTLEEPPKHVVFIFATTEFQKI  162 (613)
T ss_pred             HHHHHCCCCCCCCCEEEEECCHHHCCHHHH--HHH-------HHHCCCCCCCCEEEEEECCHHHC
T ss_conf             999708587579945999816221799999--999-------98534898783799982881549