HHsearch alignment for GI: 254780709 and conserved domain: PRK05917

>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=96.60  E-value=0.016  Score=38.06  Aligned_cols=128  Identities=13%  Similarity=0.127  Sum_probs=68.1

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC-CCCC---CCHHHHH
Q ss_conf             66741231135444442478999999985226742677434512456889999975303532122-3586---6124542
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCS-EIGS---DAAALAY  183 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~-~~~~---dp~~v~~  183 (321)
T Consensus        16 ~Rl~HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p-----~~~~~---------i~~~~HPD~~~i~pe~k~~~~~Id~iR   81 (290)
T PRK05917         16 QKVPSAILLHGQDLSNLSQYAYELASLILLESSP-----EAQYK---------ISQKIHPDIHEFFPEGKGRLHSIETPR   81 (290)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCC-----CHHHH---------HHHCCCCCEEEECCCCCCCCCCHHHHH
T ss_conf             9966068768999865999999999998578996-----16889---------874689985996157778878678999


Q ss_pred             HHHHHHH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             2899996----51487599865433321157789999899876302223430112310233522577899987643589
Q gi|254780709|r  184 EAFKQAQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHAVAGT  258 (321)
Q Consensus       184 ~a~~~a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~F~~~~~~  258 (321)
T Consensus        82 ~l~~~i~~~p~~g~~KV~IId~Ad~Mn~~Aa--NAL-------LKtLEEPP~~tvfILit~~~~~lLpTI~SRCQ~I~i  151 (290)
T PRK05917         82 AIKKQIWIHPYEANYKIYIIHEADRMTLDAI--SAF-------LKVLEDPPKHSVIILTSAKPQRLPPTIRSRSLSIHI  151 (290)
T ss_pred             HHHHHHCCCCCCCCCEEEEECCHHHHCHHHH--HHH-------HHHHCCCCCCEEEEEEECCHHHCCHHHHHCCCEEEC
T ss_conf             9999964186468826999756776389999--999-------997347987859999869925482377633511677