HHsearch alignment for GI: 254780709 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.30 E-value=0.0012 Score=45.98 Aligned_cols=119 Identities=18% Similarity=0.238 Sum_probs=61.1
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC----CCCCCCHHH
Q ss_conf 674123113544444247899999998522---6742677434512456889999975303532122----358661245
Q gi|254780709|r 109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDA---GLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCS----EIGSDAAAL 181 (321)
Q Consensus 109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~---g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~----~~~~dp~~v 181 (321)
T Consensus 41 ~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~-----c~~c~~i~~~~~~dv~EiDaas~~gv~~ir~ 115 (507)
T PRK06645 41 RLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEK-----CTNCISFNNHNHPDIIEIDAASKTSVDDIRR 115 (507)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-----CHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
T ss_conf 96634774587997889999999999679998888998888888-----7678998658999859963788888899999
Q ss_pred HHHHHHHHH-HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 422899996-5148759986543332115778999989987630222343011231023352
Q gi|254780709|r 182 AYEAFKQAQ-AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG 242 (321)
Q Consensus 182 ~~~a~~~a~-~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g 242 (321)
T Consensus 116 l~~~~~~~p~~~~~kv~iidE~hmls~~a--~nal-------lktlEepp~~~~Fi~-atte 167 (507)
T PRK06645 116 IIESAEYKPLQGKHKIFIIDEVHMLSKGA--FNAL-------LKTLEEPPPHIIFIF-ATTE 167 (507)
T ss_pred HHHHCCCCCCCCCEEEEEECCHHHCCHHH--HHHH-------HHHHHCCCCCEEEEE-ECCC
T ss_conf 98635517876743589952142248999--9999-------997427864438999-7485