HHsearch alignment for GI: 254780709 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=97.23 E-value=0.0041 Score=42.17 Aligned_cols=85 Identities=24% Similarity=0.292 Sum_probs=56.7
Q ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 12311354444424789999999852267426774345124568899999753035321223586612454228999965
Q gi|254780709|r 112 HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQA 191 (321)
Q Consensus 112 ~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~ 191 (321)
T Consensus 184 ~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L----~~~l~~~~-------~~-~~~~~-----~~~~~~--l 244 (330)
T PRK06835 184 ENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDEL----IENLREIR-------FN-NDNDA-----PELEDL--L 244 (330)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHH----HHHHHHHH-------CC-CCCCH-----HHHHHH--H
T ss_conf 866988999998899999999999987994999629999----99999975-------45-76448-----999999--9
Q ss_pred HCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 148759986543332115778999
Q gi|254780709|r 192 KKVDVLIIDTAGRLHNNSILMAGI 215 (321)
Q Consensus 192 ~~~DvvliDTAGR~~~~~~lm~EL 215 (321)
T Consensus 245 ~~~DLLIIDDLG~E~~t~~~~~~L 268 (330)
T PRK06835 245 INCDLLIIDDLGTESITEFSKTEL 268 (330)
T ss_pred HHCCEEEEECCCCCCCCHHHHHHH
T ss_conf 618989972103455886899999