HHsearch alignment for GI: 254780709 and conserved domain: PRK07471

>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=97.11  E-value=0.0034  Score=42.76  Aligned_cols=134  Identities=16%  Similarity=0.125  Sum_probs=63.4

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE--ECC-CCCH----HHHHHHHHHHHHHCCCCCCCCC---CC-
Q ss_conf             66741231135444442478999999985226742677--434-5124----5688999997530353212235---86-
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLA--AGD-TFRS----AAIDQLKIWADRTSADFVCSEI---GS-  176 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lv--a~D-tfR~----aA~eQL~~~a~~~~v~~~~~~~---~~-  176 (321)
T Consensus        36 grl~HA~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i~~~-~hpdl~~i~r~~d~k~~~  114 (363)
T PRK07471         36 GRLHHAWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPDHPVARRIAAG-AHGGLLTLERSWNEKGKR  114 (363)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCC-CCCCEEEEECCCCCCCCC
T ss_conf             9976458767999818899999999998579997777767870531258777289999526-999846676200113332


Q ss_pred             ----CCHHHHHHHHHHHH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf             ----61245422899996----5148759986543332115778999989987630222343011231023352257789
Q gi|254780709|r  177 ----DAAALAYEAFKQAQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQ  248 (321)
Q Consensus       177 ----dp~~v~~~a~~~a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~  248 (321)
T Consensus       115 ~~~~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~mn~~a--aNALLK-------~LEEPP~~t~fiLit~~~~~llpT  185 (363)
T PRK07471        115 LRTVITVDEVRETIGFFGLTAAEGGWRVVIVDTADEMNANA--ANALLK-------VLEEPPARSLLLLVSHAPARLLPT  185 (363)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHH--HHHHHH-------HHCCCCCCEEEEEEECCHHHCHHH
T ss_conf             12445399999999997248524896699986878738899--999999-------721589883899863997777799


Q ss_pred             HHH
Q ss_conf             998
Q gi|254780709|r  249 VEM  251 (321)
Q Consensus       249 a~~  251 (321)
T Consensus       186 I~S  188 (363)
T PRK07471        186 IRS  188 (363)
T ss_pred             HHH
T ss_conf             997