HHsearch alignment for GI: 254780709 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=97.57  E-value=0.00079  Score=47.17  Aligned_cols=152  Identities=11%  Similarity=0.192  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH----HH-HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             99999999973889899999999999875127899899999----99-99878520100121000136674123113544
Q gi|254780709|r   46 REELEDLLIRSDIGVAVAQKIVEELLTKRYAKDVSVQRVLY----DV-SELIHKMLMPLSKPFNWDFSHRPHVILVVGVN  120 (321)
Q Consensus        46 leeLee~LL~ADVg~~va~~Iie~ik~~~~~~~i~~~~i~~----~l-~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~n  120 (321)
T Consensus        42 ~~e~L~~Lle~E~~~R~~rr~~rrlk~A~fp~~ktLe~fDf~~~p~i~~~~i~~L~~-~~~--fi---~~~~Nvil~Gp~  115 (269)
T PRK08181         42 AARFLAAIAEHEIAERARRRIERHLAEAHLPPGKTLDSFDFEAVPMISKAQVMALAA-GDS--WL---AKGANLLLFGPP  115 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHC-CCH--HH---HCCCEEEEECCC
T ss_conf             999999999999999999999999986897998886547855689989999999965-675--88---648708998999


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             44424789999999852267426774345124568899999753035321223586612454228999965148759986
Q gi|254780709|r  121 GVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAKKVDVLIID  200 (321)
Q Consensus       121 G~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~~~DvvliD  200 (321)
T Consensus       116 GtGKThLA~Alg~~A~~~G~~V~f~~~~~L----~~~L~~a----------~~~~~-----~~~~~~--~l~~~dLLIiD  174 (269)
T PRK08181        116 GGGKSHLAAAIGLALIENGWRVLFTRTTDL----VQKLQVA----------RRELQ-----LESAIA--KLDKFDLLILD  174 (269)
T ss_pred             CCCHHHHHHHHHHHHHHCCCEEEEEEHHHH----HHHHHHH----------HHCCC-----HHHHHH--HHHCCCEEEEH
T ss_conf             987889999999999987993999789999----9999997----------75583-----999999--97444601220


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             543332115778999989987630222
Q gi|254780709|r  201 TAGRLHNNSILMAGIGKMIRVLKRLDP  227 (321)
Q Consensus       201 TAGR~~~~~~lm~EL~ki~~v~~~~~~  227 (321)
T Consensus       175 e~G~~~~~~~~~~---~lf~lI~~Rye  198 (269)
T PRK08181        175 DLAYVTKDQAETS---VLFELISARYE  198 (269)
T ss_pred             HCCCCCCCHHHHH---HHHHHHHHHHC
T ss_conf             1056679989999---99999999857