HHsearch alignment for GI: 254780709 and conserved domain: PRK08533

Probab=97.76  E-value=0.00037  Score=49.46  Aligned_cols=95  Identities=18%  Similarity=0.184  Sum_probs=67.9

Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH----------CCCCCCCCCC-CCC
Q ss_conf             74123113544444247899999998522674267743451245688999997530----------3532122358-661
Q gi|254780709|r  110 RPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRT----------SADFVCSEIG-SDA  178 (321)
Q Consensus       110 ~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~----------~v~~~~~~~~-~dp  178 (321)
T Consensus        23 ~gs~~li~G~~GtGKsi~~~~~~~~~l~~g~~~~yis~e~t~~~~i~qm~s~g~di~~~~~~G~l~~i~~~~~~~~~~~~  102 (230)
T PRK08533         23 FGSIILIEGDESTGKSILSQRLAYGFLQNGYSVSYVSSQLTTTEFIKQMMSLGYDINKKLISGKLLYIPVYPLLSGNSEK  102 (230)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCCCCHHHH
T ss_conf             98489998689987899999999999878986999994389999999999869981799757967999613433540457


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             24542289999651487599865433
Q gi|254780709|r  179 AALAYEAFKQAQAKKVDVLIIDTAGR  204 (321)
Q Consensus       179 ~~v~~~a~~~a~~~~~DvvliDTAGR  204 (321)
T Consensus       103 ~~~L~~ll~~~~~~~~dvIIIDSlS~  128 (230)
T PRK08533        103 RDFLDKLMNTRRFYEKDVVIIDSLSS  128 (230)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf             89999997326643798999905318