HHsearch alignment for GI: 254780709 and conserved domain: PRK09354

Probab=96.86  E-value=0.0062  Score=40.91  Aligned_cols=92  Identities=18%  Similarity=0.280  Sum_probs=63.1

Q ss_pred             CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC---CCCCCCCCHHHHHHHHHH
Q ss_conf             12311354444424789999999852267426774345124568899999753035321---223586612454228999
Q gi|254780709|r  112 HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFV---CSEIGSDAAALAYEAFKQ  188 (321)
Q Consensus       112 ~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~---~~~~~~dp~~v~~~a~~~  188 (321)
T Consensus        61 RivEi~G~esSGKTtlal~~iaeaQk~Gg~~a~iDaE~--a--l--d~~~a~~lGVd~d~llv~qp--d~~Eqal~i~e~  132 (350)
T PRK09354         61 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEH--A--L--DPVYAKKLGVDIDNLLVSQP--DTGEQALEIADA  132 (350)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC--C--C--CHHHHHHCCCCHHHEEEECC--CHHHHHHHHHHH
T ss_conf             08999889877799999999999997599479996000--2--7--98899984977157178568--679999999999


Q ss_pred             HH-HHCCCEEEEECCCCCCCHHHH
Q ss_conf             96-514875998654333211577
Q gi|254780709|r  189 AQ-AKKVDVLIIDTAGRLHNNSIL  211 (321)
Q Consensus       189 a~-~~~~DvvliDTAGR~~~~~~l  211 (321)
T Consensus       133 Lvrsg~vd~IVvDSVaAL~pk~Ei  156 (350)
T PRK09354        133 LVRSGAVDLIVVDSVAALVPKAEI  156 (350)
T ss_pred             HHHCCCCCEEEEECCCCCCCHHHH
T ss_conf             985488418998253345768887