HHsearch alignment for GI: 254780709 and conserved domain: PRK10463

Probab=98.02  E-value=5.9e-05  Score=55.11  Aligned_cols=167  Identities=20%  Similarity=0.296  Sum_probs=113.8

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC---CHHHHHHH
Q ss_conf             674123113544444247899999998522674267743451245688999997530353212235866---12454228
Q gi|254780709|r  109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSD---AAALAYEA  185 (321)
Q Consensus       109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~d---p~~v~~~a  185 (321)
T Consensus       102 ~gv~~lNl~sSPGSGKTtLLe~ti~~L~~~-~~~aVIeGD~~T~~DA~RI~~----~Gv~avQInTG~~CHLDA~MV~~a  176 (290)
T PRK10463        102 RKQLVLNLVSSPGSGKTTLLTETLMRLKDS-VPCAVIEGDQQTVNDAARIRA----TGTPAIQVNTGKGCHLDAQMIADA  176 (290)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHHHH----CCCCEEEECCCCCCCCCHHHHHHH
T ss_conf             791899930699878899999999987336-757999604235667999997----699589954799767599999999


Q ss_pred             HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH-HHHHHHHHHHHCCCCEEEEE
Q ss_conf             99996514875998654333211577899998998763022234301123102335225-77899987643589769996
Q gi|254780709|r  186 FKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN-ALRQVEMFHAVAGTTGLIMT  264 (321)
Q Consensus       186 ~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~-~~~~a~~F~~~~~~~g~I~T  264 (321)
T Consensus       177 l~~l~l~~~dllfIENVGNLV---------------CPA~FDLGE~~kVvvlSVtEGeDKPlKYP~mF~~a---d~vlin  238 (290)
T PRK10463        177 APRLPLDDNGILFIENVGNLV---------------CPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAA---SLMLLN  238 (290)
T ss_pred             HHHCCCCCCCEEEEECCCCCC---------------CCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHC---CEEEEE
T ss_conf             984898779899981278843---------------55120367761799997068888644476676425---789986


Q ss_pred             CCCCCCCHH----HHHHHHHH--HCCCEEEEE--CCCCCCCC
Q ss_conf             545787069----99999999--769889997--58981325
Q gi|254780709|r  265 KMDGTARGG----GLIPIVVT--HKIPVYFLG--VGEGINDL  298 (321)
Q Consensus       265 KlD~ta~~G----~~ls~~~~--~~~Pi~fig--~Ge~i~Dl  298 (321)
T Consensus       239 KiDLlp~~dFD~~~~~~~~~~vNp~~~v~~vSa~tGeGld~W  280 (290)
T PRK10463        239 KVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQW  280 (290)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
T ss_conf             565122028899999999998698985899756888789999