HHsearch alignment for GI: 254780709 and conserved domain: PRK12317

>PRK12317 elongation factor 1-alpha; Reviewed.
Probab=96.59  E-value=0.01  Score=39.44  Aligned_cols=134  Identities=22%  Similarity=0.295  Sum_probs=71.0

Q ss_pred             CCCCCE-EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC--CCC-------
Q ss_conf             667412-3113544444247899999998522674267743451245688999997530353212235--866-------
Q gi|254780709|r  108 SHRPHV-ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEI--GSD-------  177 (321)
Q Consensus       108 ~~~p~v-il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~--~~d-------  177 (321)
T Consensus         3 ~~K~~l~i~~~GhVD~GKSTL~G~Ll~~~g------------~~~~~~~~~~~~~~~~~g~~s~~~a~~~D~~~eEr~rG   70 (426)
T PRK12317          3 KEKPHLNLAVIGHVDHGKSTLVGRLLYETG------------AVDEHIIEEYEEEAKKKGKESFKFAWVMDRLKEERERG   70 (426)
T ss_pred             CCCCEEEEEEEEECCCCHHHHHHHHHHHCC------------CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCC
T ss_conf             989784999995228768888768987729------------94489999999899864877521432125786687558


Q ss_pred             -CHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC--CHH--HHHHHHHH
Q ss_conf             -1245422899996514875998654333211577899998998763022234301123102335--225--77899987
Q gi|254780709|r  178 -AAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATT--GQN--ALRQVEMF  252 (321)
Q Consensus       178 -p~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~--gq~--~~~~a~~F  252 (321)
T Consensus        71 iTid~~~---~~f~~~~~~~~iiD~PGH~~fi~nmi~G------------as~~D~ailvV~A~~~~G~~~QT~eHl~l-  134 (426)
T PRK12317         71 VTIDLAH---KKFETDKYYFTIIDCPGHRDFVKNMITG------------ASQADAAVLVVSARDAGGVMPQTREHVFL-  134 (426)
T ss_pred             CEEEEEE---EEEECCCCEEEEEECCCCHHHHHHHHHH------------HCCCCEEEEEEECCCCCCCCHHHHHHHHH-
T ss_conf             2788316---9995498169998789636678778745------------34677279999636566764778999999-


Q ss_pred             HHHCCCCEE--EEECCCCC
Q ss_conf             643589769--99654578
Q gi|254780709|r  253 HAVAGTTGL--IMTKMDGT  269 (321)
Q Consensus       253 ~~~~~~~g~--I~TKlD~t  269 (321)
T Consensus       135 ~~~lgi~~iiV~vnKmD~v  153 (426)
T PRK12317        135 ARTLGINQLIVAINKMDAV  153 (426)
T ss_pred             HHHHCCCEEEEEEECCCCC
T ss_conf             9980998399999533356