HHsearch alignment for GI: 254780709 and conserved domain: PRK12317
>PRK12317 elongation factor 1-alpha; Reviewed.
Probab=96.59 E-value=0.01 Score=39.44 Aligned_cols=134 Identities=22% Similarity=0.295 Sum_probs=71.0
Q ss_pred CCCCCE-EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC--CCC-------
Q ss_conf 667412-3113544444247899999998522674267743451245688999997530353212235--866-------
Q gi|254780709|r 108 SHRPHV-ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEI--GSD------- 177 (321)
Q Consensus 108 ~~~p~v-il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~--~~d------- 177 (321)
T Consensus 3 ~~K~~l~i~~~GhVD~GKSTL~G~Ll~~~g------------~~~~~~~~~~~~~~~~~g~~s~~~a~~~D~~~eEr~rG 70 (426)
T PRK12317 3 KEKPHLNLAVIGHVDHGKSTLVGRLLYETG------------AVDEHIIEEYEEEAKKKGKESFKFAWVMDRLKEERERG 70 (426)
T ss_pred CCCCEEEEEEEEECCCCHHHHHHHHHHHCC------------CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCC
T ss_conf 989784999995228768888768987729------------94489999999899864877521432125786687558
Q ss_pred -CHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC--CHH--HHHHHHHH
Q ss_conf -1245422899996514875998654333211577899998998763022234301123102335--225--77899987
Q gi|254780709|r 178 -AAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATT--GQN--ALRQVEMF 252 (321)
Q Consensus 178 -p~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~--gq~--~~~~a~~F 252 (321)
T Consensus 71 iTid~~~---~~f~~~~~~~~iiD~PGH~~fi~nmi~G------------as~~D~ailvV~A~~~~G~~~QT~eHl~l- 134 (426)
T PRK12317 71 VTIDLAH---KKFETDKYYFTIIDCPGHRDFVKNMITG------------ASQADAAVLVVSARDAGGVMPQTREHVFL- 134 (426)
T ss_pred CEEEEEE---EEEECCCCEEEEEECCCCHHHHHHHHHH------------HCCCCEEEEEEECCCCCCCCHHHHHHHHH-
T ss_conf 2788316---9995498169998789636678778745------------34677279999636566764778999999-
Q ss_pred HHHCCCCEE--EEECCCCC
Q ss_conf 643589769--99654578
Q gi|254780709|r 253 HAVAGTTGL--IMTKMDGT 269 (321)
Q Consensus 253 ~~~~~~~g~--I~TKlD~t 269 (321)
T Consensus 135 ~~~lgi~~iiV~vnKmD~v 153 (426)
T PRK12317 135 ARTLGINQLIVAINKMDAV 153 (426)
T ss_pred HHHHCCCEEEEEEECCCCC
T ss_conf 9980998399999533356