HHsearch alignment for GI: 254780709 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=95.63 E-value=0.068 Score=33.61 Aligned_cols=87 Identities=15% Similarity=0.300 Sum_probs=58.2
Q ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH--
Q ss_conf 123113544444247899999998522674267743451245688999997530353212235866124542289999--
Q gi|254780709|r 112 HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQA-- 189 (321)
Q Consensus 112 ~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a-- 189 (321)
T Consensus 142 NPLfIyG~~GlGKTHLL~AIgn~i~~~~~kV~Yvtae~F~~~~v~ai~~---------------~~--------~~~Fr~ 198 (455)
T PRK12422 142 NPIYLFGPEGSGKTHLMQAAVSALRESGGKILYVSSELFTEHLVSAIRS---------------GE--------MQRFRS 198 (455)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHC---------------CC--------HHHHHH
T ss_conf 8758878999978999999999853799869997499999999999975---------------88--------999999
Q ss_pred HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 65148759986543332115778999989987
Q gi|254780709|r 190 QAKKVDVLIIDTAGRLHNNSILMAGIGKMIRV 221 (321)
Q Consensus 190 ~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v 221 (321)
T Consensus 199 ~yr~~DvLLIDDIQfl~gK~~tqeEff~tfN~ 230 (455)
T PRK12422 199 FYRNVDALFIEDIEVFSGKGATQEEFFHTFNS 230 (455)
T ss_pred HHHCCCEEEEEHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99638877631478872848899999999999