HHsearch alignment for GI: 254780709 and conserved domain: PRK13234
>PRK13234 nifH nitrogenase reductase; Reviewed.
Probab=97.77 E-value=0.0025 Score=43.64 Aligned_cols=164 Identities=13% Similarity=0.107 Sum_probs=99.0
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH-----------H-HHHHHHH--H-----------HH
Q ss_conf 41231135444442478999999985226742677434512456-----------8-8999997--5-----------30
Q gi|254780709|r 111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAA-----------I-DQLKIWA--D-----------RT 165 (321)
Q Consensus 111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA-----------~-eQL~~~a--~-----------~~ 165 (321)
T Consensus 4 mr~IAiYGKGGIGKSTtssNlsAAlA~~G~rVl~IGCDPK~DSTr~Llgg~~~~Tvld~~~~~~~~ed~~ledvv~~G~~ 83 (293)
T PRK13234 4 LRQIAFYGKGGIGKSTTSQNTLAALVEMGQKILIVGCDPKADSTRLILNAKAQDTVLSLAAEAGSVEDLELEDVMKIGYK 83 (293)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCC
T ss_conf 75799977984458778999999999779969997489831656876289999708899876498121538789743779
Q ss_pred CCCCCCCCCCCCCH--------HHHHHHHHHHH-HHCCCEEEEECCCCC---CCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 35321223586612--------45422899996-514875998654333---2115778999989987630222343011
Q gi|254780709|r 166 SADFVCSEIGSDAA--------ALAYEAFKQAQ-AKKVDVLIIDTAGRL---HNNSILMAGIGKMIRVLKRLDPHAPHSV 233 (321)
Q Consensus 166 ~v~~~~~~~~~dp~--------~v~~~a~~~a~-~~~~DvvliDTAGR~---~~~~~lm~EL~ki~~v~~~~~~~~p~~~ 233 (321)
T Consensus 84 gI~CVEs-GGPePGvGCAGRGIitai~~Le~lga~ed~D~V~yDVLGDVVCGGFAmPi--------------r~g~A~ev 148 (293)
T PRK13234 84 GIKCVES-GGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPI--------------RENKAQEI 148 (293)
T ss_pred CEEEEEC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC--------------CCCCCCEE
T ss_conf 8489768-99899888777131467888877187657999999567766514755665--------------45887689
Q ss_pred EEECCC--CCCHHHHHHH---HHHHH--HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 231023--3522577899---98764--35897699965457870699999999976988999
Q gi|254780709|r 234 LQVLDA--TTGQNALRQV---EMFHA--VAGTTGLIMTKMDGTARGGGLIPIVVTHKIPVYFL 289 (321)
Q Consensus 234 ~lVlda--~~gq~~~~~a---~~F~~--~~~~~g~I~TKlD~ta~~G~~ls~~~~~~~Pi~fi 289 (321)
T Consensus 149 yIVtSge~mslyAANnI~~~i~~~~~~g~~rlgGlI~N~r~~~~e~~~v~~fa~~~gt~ii~~ 211 (293)
T PRK13234 149 YIVMSGEMMALYAANNIAKGILKYANSGGVRLGGLICNERQTDRELELAEALAKRLGSKLIHF 211 (293)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 999467187999999999999998632696246899717898537999999999849937997