HHsearch alignment for GI: 254780709 and conserved domain: PRK13896

>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional.
Probab=97.49  E-value=0.0041  Score=42.18  Aligned_cols=171  Identities=18%  Similarity=0.224  Sum_probs=94.5

Q ss_pred             EECCCCC-CCCHHHHHHHHHHHHHHCCCCEEE--EECCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHHHH
Q ss_conf             3113544-444247899999998522674267--7434512456889999975303532122358-66124542289999
Q gi|254780709|r  114 ILVVGVN-GVGKTTVIGKLSKKMSDAGLKVML--AAGDTFRSAAIDQLKIWADRTSADFVCSEIG-SDAAALAYEAFKQA  189 (321)
Q Consensus       114 il~vG~n-G~GKTTT~aKLA~~~~~~g~kV~l--va~DtfR~aA~eQL~~~a~~~~v~~~~~~~~-~dp~~v~~~a~~~a  189 (321)
T Consensus         4 ilIAa~~SgsGKTtvt~gL~~aL~~rG~~Vq~FK~GPDYIDP------~~h~~a~G~~~~NLD~~m~~~~~v-~~~~---   73 (432)
T PRK13896          4 VVLAGTSSGVGKTVATLAVLQALADAGYDVQPAKAGPDFIDP------SHHEAVVDTPSRSLDPWLSGEDGM-RRTY---   73 (432)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH------HHHHHHHCCCCCCCCHHHCCHHHH-HHHH---
T ss_conf             899778999989999999999999784963766668475198------999999689844689101898999-9999---


Q ss_pred             HHHCCCEEEEECCCCCCC-HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-CCHHHHHHHHHHHHH-------CCCCE
Q ss_conf             651487599865433321-157789999899876302223430112310233-522577899987643-------58976
Q gi|254780709|r  190 QAKKVDVLIIDTAGRLHN-NSILMAGIGKMIRVLKRLDPHAPHSVLQVLDAT-TGQNALRQVEMFHAV-------AGTTG  260 (321)
Q Consensus       190 ~~~~~DvvliDTAGR~~~-~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~-~gq~~~~~a~~F~~~-------~~~~g  260 (321)
T Consensus        74 ~~~~aDiaviEGvMGLyDG~~~Sta~lA~~l---~-------~PVvLVvd~~~~~~s~aA~v~G~~~f~~~~~~d~~iaG  143 (432)
T PRK13896         74 WRGTGDVCVVEGMMGLYDGTVASTAAVAEEL---D-------LPVVLVVDAKAGMESVAATALGFQAYADRAGVDIDVAG  143 (432)
T ss_pred             HHCCCCEEEEEECCCCCCCCCCCHHHHHHHH---C-------CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             7279986999612324578877589999984---9-------99899993320188899999999972412476524766


Q ss_pred             EEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             99965457870699999999976988999758981325557789999987286
Q gi|254780709|r  261 LIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEGINDLEPFVAKDFSAVITGC  313 (321)
Q Consensus       261 ~I~TKlD~ta~~G~~ls~~~~~~~Pi~fig~Ge~i~Dl~~f~~~~~~~~llG~  313 (321)
T Consensus       144 VIlN~v~s~rh~~~l~~al~~-~i~v--lG~lPr~~~l~------lp~RHLGL  187 (432)
T PRK13896        144 VLAQRAHGGRHADGIRDALPD-ELTY--FGRVPPRSDLE------IPDRHLGL  187 (432)
T ss_pred             EEECCCCCHHHHHHHHHHHHC-CCCE--EEEECCCCCCC------CCCCCCCC
T ss_conf             884267758899999999870-8948--98842477789------84102598