HHsearch alignment for GI: 254780709 and conserved domain: PRK13896
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional.
Probab=97.49 E-value=0.0041 Score=42.18 Aligned_cols=171 Identities=18% Similarity=0.224 Sum_probs=94.5
Q ss_pred EECCCCC-CCCHHHHHHHHHHHHHHCCCCEEE--EECCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHHHH
Q ss_conf 3113544-444247899999998522674267--7434512456889999975303532122358-66124542289999
Q gi|254780709|r 114 ILVVGVN-GVGKTTVIGKLSKKMSDAGLKVML--AAGDTFRSAAIDQLKIWADRTSADFVCSEIG-SDAAALAYEAFKQA 189 (321)
Q Consensus 114 il~vG~n-G~GKTTT~aKLA~~~~~~g~kV~l--va~DtfR~aA~eQL~~~a~~~~v~~~~~~~~-~dp~~v~~~a~~~a 189 (321)
T Consensus 4 ilIAa~~SgsGKTtvt~gL~~aL~~rG~~Vq~FK~GPDYIDP------~~h~~a~G~~~~NLD~~m~~~~~v-~~~~--- 73 (432)
T PRK13896 4 VVLAGTSSGVGKTVATLAVLQALADAGYDVQPAKAGPDFIDP------SHHEAVVDTPSRSLDPWLSGEDGM-RRTY--- 73 (432)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH------HHHHHHHCCCCCCCCHHHCCHHHH-HHHH---
T ss_conf 899778999989999999999999784963766668475198------999999689844689101898999-9999---
Q ss_pred HHHCCCEEEEECCCCCCC-HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-CCHHHHHHHHHHHHH-------CCCCE
Q ss_conf 651487599865433321-157789999899876302223430112310233-522577899987643-------58976
Q gi|254780709|r 190 QAKKVDVLIIDTAGRLHN-NSILMAGIGKMIRVLKRLDPHAPHSVLQVLDAT-TGQNALRQVEMFHAV-------AGTTG 260 (321)
Q Consensus 190 ~~~~~DvvliDTAGR~~~-~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~-~gq~~~~~a~~F~~~-------~~~~g 260 (321)
T Consensus 74 ~~~~aDiaviEGvMGLyDG~~~Sta~lA~~l---~-------~PVvLVvd~~~~~~s~aA~v~G~~~f~~~~~~d~~iaG 143 (432)
T PRK13896 74 WRGTGDVCVVEGMMGLYDGTVASTAAVAEEL---D-------LPVVLVVDAKAGMESVAATALGFQAYADRAGVDIDVAG 143 (432)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCHHHHHHHH---C-------CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 7279986999612324578877589999984---9-------99899993320188899999999972412476524766
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 99965457870699999999976988999758981325557789999987286
Q gi|254780709|r 261 LIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEGINDLEPFVAKDFSAVITGC 313 (321)
Q Consensus 261 ~I~TKlD~ta~~G~~ls~~~~~~~Pi~fig~Ge~i~Dl~~f~~~~~~~~llG~ 313 (321)
T Consensus 144 VIlN~v~s~rh~~~l~~al~~-~i~v--lG~lPr~~~l~------lp~RHLGL 187 (432)
T PRK13896 144 VLAQRAHGGRHADGIRDALPD-ELTY--FGRVPPRSDLE------IPDRHLGL 187 (432)
T ss_pred EEECCCCCHHHHHHHHHHHHC-CCCE--EEEECCCCCCC------CCCCCCCC
T ss_conf 884267758899999999870-8948--98842477789------84102598