HHsearch alignment for GI: 254780709 and conserved domain: PTZ00336
>PTZ00336 elongation factor 1-alpha; Provisional.
Probab=96.10 E-value=0.033 Score=35.85 Aligned_cols=132 Identities=22% Similarity=0.293 Sum_probs=69.9
Q ss_pred CCCCCE-EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC---------CCCCC-C
Q ss_conf 667412-311354444424789999999852267426774345124568899999753035321---------22358-6
Q gi|254780709|r 108 SHRPHV-ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFV---------CSEIG-S 176 (321)
Q Consensus 108 ~~~p~v-il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~---------~~~~~-~ 176 (321)
T Consensus 3 ~~K~~lni~~~GhVD~GKSTL~G~Ll~~~~~v---------~---~~~l~~~~~~~~~~g~~s~~~a~~~D~~~~Er~rG 70 (449)
T PTZ00336 3 KDKVHMNLVVVGHVDAGKSTATGHLIYKCGGI---------D---KRTIEKFEKEAAEIGKASFKYAWVLDKLKAERERG 70 (449)
T ss_pred CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC---------C---HHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCC
T ss_conf 98864399999277896888899999874884---------7---89999999999871875143254512772232287
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC----------HHHH
Q ss_conf 612454228999965148759986543332115778999989987630222343011231023352----------2577
Q gi|254780709|r 177 DAAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG----------QNAL 246 (321)
Q Consensus 177 dp~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g----------q~~~ 246 (321)
T Consensus 71 iTid~~~~---~f~t~~~~~~iiD~PGH~~fi~nmi~Ga------------s~aD~aiLVVdA~~G~~e~g~~~~gQT-r 134 (449)
T PTZ00336 71 ITIDIALW---KFESPKSVFTIIDAPGHRDFIKNMITGT------------SQADAAILMIDSTHGGFEAGISKDGQT-R 134 (449)
T ss_pred EEEEEEEE---EEECCCEEEEEEECCCHHHHHHHHHHHH------------CCCCEEEEEEECCCCCEECCCCCCCCC-H
T ss_conf 58986799---9974984899986894688899999765------------006767999987877410355667753-9
Q ss_pred HHHHHHHHHCCCCEEE--EECCCC
Q ss_conf 8999876435897699--965457
Q gi|254780709|r 247 RQVEMFHAVAGTTGLI--MTKMDG 268 (321)
Q Consensus 247 ~~a~~F~~~~~~~g~I--~TKlD~ 268 (321)
T Consensus 135 eHl~i-~~~Lgv~~iiV~vNKmD~ 157 (449)
T PTZ00336 135 EHALL-AFTLGVKQMVVCCNKMDD 157 (449)
T ss_pred HHHHH-HHHCCCCEEEEEEECCCC
T ss_conf 99999-986699779999862015