HHsearch alignment for GI: 254780709 and conserved domain: PTZ00336

>PTZ00336 elongation factor 1-alpha; Provisional.
Probab=96.10  E-value=0.033  Score=35.85  Aligned_cols=132  Identities=22%  Similarity=0.293  Sum_probs=69.9

Q ss_pred             CCCCCE-EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC---------CCCCC-C
Q ss_conf             667412-311354444424789999999852267426774345124568899999753035321---------22358-6
Q gi|254780709|r  108 SHRPHV-ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFV---------CSEIG-S  176 (321)
Q Consensus       108 ~~~p~v-il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~---------~~~~~-~  176 (321)
T Consensus         3 ~~K~~lni~~~GhVD~GKSTL~G~Ll~~~~~v---------~---~~~l~~~~~~~~~~g~~s~~~a~~~D~~~~Er~rG   70 (449)
T PTZ00336          3 KDKVHMNLVVVGHVDAGKSTATGHLIYKCGGI---------D---KRTIEKFEKEAAEIGKASFKYAWVLDKLKAERERG   70 (449)
T ss_pred             CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC---------C---HHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCC
T ss_conf             98864399999277896888899999874884---------7---89999999999871875143254512772232287


Q ss_pred             CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC----------HHHH
Q ss_conf             612454228999965148759986543332115778999989987630222343011231023352----------2577
Q gi|254780709|r  177 DAAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG----------QNAL  246 (321)
Q Consensus       177 dp~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g----------q~~~  246 (321)
T Consensus        71 iTid~~~~---~f~t~~~~~~iiD~PGH~~fi~nmi~Ga------------s~aD~aiLVVdA~~G~~e~g~~~~gQT-r  134 (449)
T PTZ00336         71 ITIDIALW---KFESPKSVFTIIDAPGHRDFIKNMITGT------------SQADAAILMIDSTHGGFEAGISKDGQT-R  134 (449)
T ss_pred             EEEEEEEE---EEECCCEEEEEEECCCHHHHHHHHHHHH------------CCCCEEEEEEECCCCCEECCCCCCCCC-H
T ss_conf             58986799---9974984899986894688899999765------------006767999987877410355667753-9


Q ss_pred             HHHHHHHHHCCCCEEE--EECCCC
Q ss_conf             8999876435897699--965457
Q gi|254780709|r  247 RQVEMFHAVAGTTGLI--MTKMDG  268 (321)
Q Consensus       247 ~~a~~F~~~~~~~g~I--~TKlD~  268 (321)
T Consensus       135 eHl~i-~~~Lgv~~iiV~vNKmD~  157 (449)
T PTZ00336        135 EHALL-AFTLGVKQMVVCCNKMDD  157 (449)
T ss_pred             HHHHH-HHHCCCCEEEEEEECCCC
T ss_conf             99999-986699779999862015