HHsearch alignment for GI: 254780709 and conserved domain: TIGR00101
>TIGR00101 ureG urease accessory protein UreG; InterPro: IPR004400 This is a GTP hydrolase for assembly of the nickel metallocentre of urease. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. They play a central role in nitrogen metabolism.; GO: 0005524 ATP binding, 0016151 nickel ion binding.
Probab=96.66 E-value=0.027 Score=36.45 Aligned_cols=159 Identities=20% Similarity=0.323 Sum_probs=107.3
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-------HHHHHHHH
Q ss_conf 31135444442478999999985226742677434512456889999975303532122358661-------24542289
Q gi|254780709|r 114 ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDA-------AALAYEAF 186 (321)
Q Consensus 114 il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp-------~~v~~~a~ 186 (321)
T Consensus 4 iG~~GPvG~Gktal~e~l~~~~~~-~y~~av~tndiyt~eda~fl~~~~~l~~~ri~GvetGGCPhtairedas~nl~a~ 82 (199)
T TIGR00101 4 IGVAGPVGSGKTALIEALTRELAK-KYDLAVITNDIYTQEDAEFLVKNSVLPPERILGVETGGCPHTAIREDASLNLEAV 82 (199)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 665047776468999999998874-0667787311001246888876412662226774158987300100021218899
Q ss_pred HHHHHH--CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-HCCCCEEEE
Q ss_conf 999651--48759986543332115778999989987630222343011231023352257789998764-358976999
Q gi|254780709|r 187 KQAQAK--KVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHA-VAGTTGLIM 263 (321)
Q Consensus 187 ~~a~~~--~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~F~~-~~~~~g~I~ 263 (321)
T Consensus 83 ~~~~~rf~~~~~~~~esGGd-----nl----------~atf~P~l~d~t~~vidva~G~kiPrk---GGPGit~sdllvi 144 (199)
T TIGR00101 83 EELEARFPDLELVFIESGGD-----NL----------SATFSPELADLTIFVIDVAEGDKIPRK---GGPGITRSDLLVI 144 (199)
T ss_pred HHHHHCCCCEEEEEEECCCC-----CC----------EEECCCCEEEEEEEEEEECCCCCCCCC---CCCCCCCHHEEEE
T ss_conf 98862156404899832886-----20----------000276402367889972058745677---8898530012243
Q ss_pred ECCCCCCCHHHHHHHHH------HHCCCEEEEEC
Q ss_conf 65457870699999999------97698899975
Q gi|254780709|r 264 TKMDGTARGGGLIPIVV------THKIPVYFLGV 291 (321)
Q Consensus 264 TKlD~ta~~G~~ls~~~------~~~~Pi~fig~ 291 (321)
T Consensus 145 nk~dlaP~vGadl~~m~rd~~~mr~~~Pf~ftn~ 178 (199)
T TIGR00101 145 NKIDLAPFVGADLKVMERDAKKMRGEKPFIFTNL 178 (199)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHH
T ss_conf 2001253112303544356786406997466400