>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit ClpA; InterPro: IPR013461 Proteins in this entry are related to ClpA () from Escherichia coli. ClpA is an ATP-dependent chaperone and part of the ClpAP protease that participates in regulatory protein degradation and the dissolution and degradation of protein aggregates . ClpA recognises sequences in specific proteins, which it then unfolds in an ATP-dependent manner and transports into the degradation chamber of the associated ClpP protein , . A small adaptor-like protein, ClpS, modulates the activity of ClpA and is an important regulatory factor for this protein . It protects ClpA from autodegradation and appears to redirect its activity away from soluble proteins and toward aggregated proteins..

Probab=97.13 E-value=0.00045 Score=48.91 Aligned_cols=132 Identities=18% Similarity=0.317 Sum_probs=70.3 Q ss_pred CCCCCHHHCCHHHHHHHHHHH------HHHHHHHHHH--H-HHCCCCCCH---HHHHHHHHH--HH-----HC------- Q ss_conf 100593541489999999999------9999999999--8-605677899---999999999--99-----73------- Q gi|254780709|r 3 NQKVASESLSWIRKLTKGFAS------TSLKLKEGIT--D-IISSRRLDD---GVREELEDL--LI-----RS------- 56 (321) Q Consensus 3 ~~~~~~e~m~~f~kLk~gL~k------t~~~L~~~l~--~-l~~~~~lde---~~leeLee~--LL-----~A------- 56 (321) T Consensus 371 ~EPs~eet~~ILkGLk~~YE~fH~V~Y~~eal~~Av~LS~ryI~DRfLPDKAIDviDEaGA~~~l~~~~~~~~~eadekG 450 (774) T TIGR02639 371 GEPSIEETVKILKGLKEQYEEFHHVKYSDEALEAAVELSARYINDRFLPDKAIDVIDEAGAAFRLRAKAKKKANEADEKG 450 (774) T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC T ss_conf 95788899999986554201325011386999999999888602578985432288999999997120277643201125 Q ss_pred -------CCCHHHHHHHHHHHHHHHHCCC--CCH-HHHHHHHHHHHHHHCCCCCCCC------------CCCCCCCCC-E Q ss_conf -------8898999999999998751278--998-9999999998785201001210------------001366741-2 Q gi|254780709|r 57 -------DIGVAVAQKIVEELLTKRYAKD--VSV-QRVLYDVSELIHKMLMPLSKPF------------NWDFSHRPH-V 113 (321) Q Consensus 57 -------DVg~~va~~Iie~ik~~~~~~~--i~~-~~i~~~l~~~L~~~L~~~~~~~------------~~~~~~~p~-v 113 (321) T Consensus 451 leetalPev~~~diE~vvak~a~-iP~~~~s~ddD~~~L~~L~~~L~~kIfGQD~AI~~lv~aiK~SrAGl~~~nkP~GS 529 (774) T TIGR02639 451 LEETALPEVNVKDIEEVVAKMAK-IPVKTVSSDDDREKLKNLEKELKAKIFGQDEAIEQLVSAIKRSRAGLGEPNKPVGS 529 (774) T ss_pred CCCCCCCCCCHHHHHHHHHHHHC-CCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE T ss_conf 30004787854449999988718-99415426447988720447630131515899999999999987424778881688 Q ss_pred EECCCCCCCCHHHHHHHHHHHH Q ss_conf 3113544444247899999998 Q gi|254780709|r 114 ILVVGVNGVGKTTVIGKLSKKM 135 (321) Q Consensus 114 il~vG~nG~GKTTT~aKLA~~~ 135 (321) T Consensus 530 FLF~GPTGVGKTElak~LA~~L 551 (774) T TIGR02639 530 FLFVGPTGVGKTELAKQLAEEL 551 (774) T ss_pred EEEECCCCCCHHHHHHHHHHHH T ss_conf 8864798962578899999970

HHsearch alignment for GI: 254780709 and conserved domain: TIGR02639