HHsearch alignment for GI: 254780709 and conserved domain: TIGR03499

Probab=100.00  E-value=3.5e-31  Score=239.16  Aligned_cols=175  Identities=25%  Similarity=0.316  Sum_probs=131.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             99999999999999999999860567789999999999999738898999999999998751278998999999999878
Q gi|254780709|r   14 IRKLTKGFASTSLKLKEGITDIISSRRLDDGVREELEDLLIRSDIGVAVAQKIVEELLTKRYAKDVSVQRVLYDVSELIH   93 (321)
Q Consensus        14 f~kLk~gL~kt~~~L~~~l~~l~~~~~lde~~leeLee~LL~ADVg~~va~~Iie~ik~~~~~~~i~~~~i~~~l~~~L~   93 (321)
T Consensus       106 ~~~l~~El~~lk~~l~~~~~~~~~~-~~~-~~~~~l~~~L~~~gv~~~~~~~l~~~~~~-----~~~~~~~~~~l~~~L~  178 (282)
T TIGR03499       106 PEELRKELSALRELLERLLAGLAWL-QRD-PEGAKLYERLEEAGVSEELARELLEKLPE-----RADAESAWRWLREALE  178 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHHH-----CCCHHHHHHHHHHHHH
T ss_conf             8999999999999999997554214-588-68999999999869999999999997460-----2997899999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH-C-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             52010012100013667412311354444424789999999852-2-674267743451245688999997530353212
Q gi|254780709|r   94 KMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSD-A-GLKVMLAAGDTFRSAAIDQLKIWADRTSADFVC  171 (321)
Q Consensus        94 ~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~-~-g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~  171 (321)
T Consensus       179 ~~i~~~--~~~~~~~~~~~vi~lvGPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~DtyRigA~eQLk~ya~il~vp~~v  256 (282)
T TIGR03499       179 NMLPVK--PEEDEILEQGGVIALVGPTGVGKTTTLAKLAARFVLEHGKKKVALITTDTYRIGAVEQLKTYAKILGVPVKV  256 (282)
T ss_pred             HHCCCC--CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEE
T ss_conf             647778--876554456727999778887578899999999999738996799980777678999999999995974899


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             23586612454228999965148759986543
Q gi|254780709|r  172 SEIGSDAAALAYEAFKQAQAKKVDVLIIDTAG  203 (321)
Q Consensus       172 ~~~~~dp~~v~~~a~~~a~~~~~DvvliDTAG  203 (321)
T Consensus       257 v~~---~~~l-~~~l~~--~~~~d~IlIDTaG  282 (282)
T TIGR03499       257 ARD---PKEL-AKALER--LRDKDLILIDTAG  282 (282)
T ss_pred             ECC---HHHH-HHHHHH--CCCCCEEEEECCC
T ss_conf             399---9999-999986--5798999981979