HHsearch alignment for GI: 254780709 and conserved domain: cd00046

>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

Probab=96.63  E-value=0.017  Score=37.80  Aligned_cols=51  Identities=20%  Similarity=0.177  Sum_probs=32.1

Q ss_pred             EECCCCCCCCHHHHHHHHHHH-HHH-CCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf             311354444424789999999-852-26742677434512456889999975303
Q gi|254780709|r  114 ILVVGVNGVGKTTVIGKLSKK-MSD-AGLKVMLAAGDTFRSAAIDQLKIWADRTS  166 (321)
Q Consensus       114 il~vG~nG~GKTTT~aKLA~~-~~~-~g~kV~lva~DtfR~aA~eQL~~~a~~~~  166 (321)
T Consensus         3 ~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~li-l~Pt-~~L~~q~~~~~~~~~~   55 (144)
T cd00046           3 VLLAAPTGSGKTLAALLPILELLDSLKGGQVLV-LAPT-RELANQVAERLKELFG   55 (144)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE-ECCH-HHHHHHHHHHHHHHCC
T ss_conf             999889971799999999999997568976999-7467-9999999999999748