HHsearch alignment for GI: 254780709 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.

Probab=97.76  E-value=0.00055  Score=48.27  Aligned_cols=58  Identities=16%  Similarity=0.227  Sum_probs=39.1

Q ss_pred             CCEEECCCCCCCCHHHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             41231135444442478999999985-2267426774345124568899999753035321
Q gi|254780709|r  111 PHVILVVGVNGVGKTTVIGKLSKKMS-DAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFV  170 (321)
Q Consensus       111 p~vil~vG~nG~GKTTT~aKLA~~~~-~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~  170 (321)
T Consensus        30 GeL~viaarpg~GKT~f~~~~a~~~~~~~g~~vl~~SlEm~~~~~--~~Rlls~~~g~~~~   88 (271)
T cd01122          30 GELIILTAGTGVGKTTFLREYALDLITQHGVRVGTISLEEPVVRT--ARRLLGQYAGKRLH   88 (271)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH--HHHHHHHHHCCCHH
T ss_conf             808999968998699999999999999769908999704999999--99999998299711