HHsearch alignment for GI: 254780709 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=97.73 E-value=0.00061 Score=47.98 Aligned_cols=151 Identities=22% Similarity=0.343 Sum_probs=76.8
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 41231135444442478999999985226742677434512456889999975303532122358661245422899996
Q gi|254780709|r 111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQ 190 (321)
Q Consensus 111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~ 190 (321)
T Consensus 2 ~~~V~ivG~pN~GKSTL~N~l~------g~~~~~vs-~---------------~pgtT-------r~~~~~~~------~ 46 (174)
T cd01895 2 PIRIAIIGRPNVGKSSLVNALL------GEERVIVS-D---------------IAGTT-------RDSIDVPF------E 46 (174)
T ss_pred CCEEEEECCCCCCHHHHHHHHH------CCCCEEEC-C---------------CCCCE-------EECCEEEE------E
T ss_conf 9899999899998999999983------89844434-9---------------99915-------73328999------9
Q ss_pred HHCCCEEEEECCCC---CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH--HHHHHHHHHCCCCEEEEEC
Q ss_conf 51487599865433---321157789999899876302223430112310233522577--8999876435897699965
Q gi|254780709|r 191 AKKVDVLIIDTAGR---LHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNAL--RQVEMFHAVAGTTGLIMTK 265 (321)
Q Consensus 191 ~~~~DvvliDTAGR---~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~--~~a~~F~~~~~~~g~I~TK 265 (321)
T Consensus 47 ~~~~~~~~vDtpGi~~~~~~~~~-~e~~-~~~~~~~~i--~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK 122 (174)
T cd01895 47 YDGKKYTLIDTAGIRRKGKVEEG-IEKY-SVLRTLKAI--ERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNK 122 (174)
T ss_pred ECCEEEEEEECCCCCCCCCCCCH-HHHH-HHHHHHHHH--HHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99988999857884213442106-8899-999999999--8428658997589899889999999999859986999856
Q ss_pred CCCCCCHHHHHHH-H----H----HHCCCEEEEEC--CCCCCCCCC
Q ss_conf 4578706999999-9----9----97698899975--898132555
Q gi|254780709|r 266 MDGTARGGGLIPI-V----V----THKIPVYFLGV--GEGINDLEP 300 (321)
Q Consensus 266 lD~ta~~G~~ls~-~----~----~~~~Pi~fig~--Ge~i~Dl~~ 300 (321)
T Consensus 123 ~Dli~~~~~~~~~~~~~~~~~~~~~~~~~ii~iSA~~g~Gi~~L~~ 168 (174)
T cd01895 123 WDLVEKDSKTMKEFKKEIRRKLPFLDYAPIVFISALTGQGVDKLFD 168 (174)
T ss_pred EECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH
T ss_conf 7526764778999999999873416899289997447989999999