HHsearch alignment for GI: 254780709 and conserved domain: cd03111

>cd03111 CpaE_like This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.

Probab=96.79  E-value=0.01  Score=39.34  Aligned_cols=38  Identities=34%  Similarity=0.535  Sum_probs=30.2

Q ss_pred             EEECCCC-CCCCHHHHHHHHHHHHHHC-CCCEEEEECCCC
Q ss_conf             2311354-4444247899999998522-674267743451
Q gi|254780709|r  113 VILVVGV-NGVGKTTVIGKLSKKMSDA-GLKVMLAAGDTF  150 (321)
Q Consensus       113 vil~vG~-nG~GKTTT~aKLA~~~~~~-g~kV~lva~Dtf  150 (321)
T Consensus         1 vi~~~~~kGGvG~Tt~A~nlA~~la~~~~~~v~lvDldlq   40 (106)
T cd03111           1 VIAFIGAKGGVGATTLAANLAVALAKEAGRRVLLVDLDLQ   40 (106)
T ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9899728998668999999999999841993899965467