HHsearch alignment for GI: 254780709 and conserved domain: cd03266
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=95.72 E-value=0.013 Score=38.66 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=30.5
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 41231135444442478999999985226742677434512
Q gi|254780709|r 111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFR 151 (321)
Q Consensus 111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR 151 (321)
T Consensus 31 Gei~gllG~NGaGKSTllk~i~Gl~~p~~G~i~i~G~d~~~ 71 (218)
T cd03266 31 GEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK 71 (218)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCC
T ss_conf 82999999999849999999977977897489999999886