>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.29 E-value=0.024 Score=36.79 Aligned_cols=182 Identities=17% Similarity=0.149 Sum_probs=84.3 Q ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 41231135444442478999999985226742677434512456889999975303532122358661245422899996 Q gi|254780709|r 111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQ 190 (321) Q Consensus 111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~ 190 (321) T Consensus 25 Ge~~~iiGpSGsGKSTLlr~i~Gl~~p~~G~I~~~G~di~~~~~~------~r~ig--~vfQ~~~Lfp~~tV~eNi~~~l 96 (235) T cd03299 25 GDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPE------KRDIS--YVPQNYALFPHMTVYKNIAYGL 96 (235) T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHH------HCCEE--EECCCCCCCCCCCHHHHHHHHH T ss_conf 989999999963599999999749999965999999999999976------78978--9457986689990999999999 Q ss_pred H-HC-------------CCEEEE-ECCCCCCCH-HHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCCH------HHHH Q ss_conf 5-14-------------875998-654333211-5778999989987630222343011231023-3522------5778 Q gi|254780709|r 191 A-KK-------------VDVLII-DTAGRLHNN-SILMAGIGKMIRVLKRLDPHAPHSVLQVLDA-TTGQ------NALR 247 (321) Q Consensus 191 ~-~~-------------~Dvvli-DTAGR~~~~-~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda-~~gq------~~~~ 247 (321) T Consensus 97 ~~~~~~~~e~~~rv~e~l~~~gl~~~~~~~p~~LSGGq~QRVaiARAl~----~~P~--llllDEP~s~LD~~~~~~i~~ 170 (235) T cd03299 97 KKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALV----VNPK--ILLLDEPFSALDVRTKEKLRE 170 (235) T ss_pred HHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCHHHHHHHHHHHHHH----CCCC--EEEEECCCCCCCHHHHHHHHH T ss_conf 8769999999999999998779977874894458999999999999997----3899--899928876469999999999 Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC-----CCHHHHHHHHCCCCC Q ss_conf 99987643589769996545787069999999997698899975898132555-----778999998728656 Q gi|254780709|r 248 QVEMFHAVAGTTGLIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEGINDLEP-----FVAKDFSAVITGCLD 315 (321) Q Consensus 248 ~a~~F~~~~~~~g~I~TKlD~ta~~G~~ls~~~~~~~Pi~fig~Ge~i~Dl~~-----f~~~~~~~~llG~gd 315 (321) T Consensus 171 ~l~~l~~~~~~T~i~vTHd---------~~~a~~~aDri~vl~~G~iv~~G~p~ev~~~P~~~~~a~flG~~n 234 (235) T cd03299 171 ELKKIRKEFGVTVLHVTHD---------FEEAWALADKVAIMLNGKLIQVGKPEEVFKKPKNEFVAEFLGFNN 234 (235) T ss_pred HHHHHHHHHCCEEEEECCC---------HHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHCCCCC T ss_conf 9999999829999998789---------999999699999998999999868899985899879998458132

HHsearch alignment for GI: 254780709 and conserved domain: cd03299