HHsearch alignment for GI: 254780709 and conserved domain: pfam00009
>pfam00009 GTP_EFTU Elongation factor Tu GTP binding domain. This domain contains a P-loop motif, also found in several other families such as pfam00071, pfam00025 and pfam00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.
Probab=98.11 E-value=5.2e-05 Score=55.48 Aligned_cols=155 Identities=23% Similarity=0.225 Sum_probs=80.2
Q ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 12311354444424789999999852267426774345124568899999753035321223586612454228999965
Q gi|254780709|r 112 HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQA 191 (321)
Q Consensus 112 ~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~ 191 (321)
T Consensus 4 rnVaivG~~n~GKSTL~n~Ll~~~~~i~~~~~~~~~~~~d~~~~E~~------rgiTi-------~~~~~~------~~~ 64 (185)
T pfam00009 4 RNIGIIGHVDHGKTTLTDALLYVTGAIDKRGEVKQEGELDRLKEERE------RGITI-------KIAAVS------FET 64 (185)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH------CCEEE-------EEEEEE------EEE
T ss_conf 78999938994499999999715487654643100333365588885------78269-------876999------960
Q ss_pred HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHH-----HHHHHHHHHHCCCCEEEEECC
Q ss_conf 148759986543332115778999989987630222343011231023352257-----789998764358976999654
Q gi|254780709|r 192 KKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNA-----LRQVEMFHAVAGTTGLIMTKM 266 (321)
Q Consensus 192 ~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~-----~~~a~~F~~~~~~~g~I~TKl 266 (321)
T Consensus 65 ~~~~i~~iDtPG--h~--~f~~~~~---~~l~-----~aD~~vlVvda~~G~~~qt~~~~~~~~~~--~~p-~iv~vNKi 129 (185)
T pfam00009 65 KKRHINIIDTPG--HV--DFTKEMI---RGAA-----QADGAILVVDAVEGVMPQTREHLLLAKQL--GVP-IIVFINKM 129 (185)
T ss_pred CCCEEEEEECCC--CC--CHHHHHH---HHHH-----HCCCCEEEEECCCCCCCCCHHHHHHHHHH--CCC-EEEEEECC
T ss_conf 893689998998--71--4399999---9986-----46564299986768532309999999982--898-79999773
Q ss_pred CCC--CCHHHHHHHHH-H---------HCCCEEEEEC--CCCCCCCCC
Q ss_conf 578--70699999999-9---------7698899975--898132555
Q gi|254780709|r 267 DGT--ARGGGLIPIVV-T---------HKIPVYFLGV--GEGINDLEP 300 (321)
Q Consensus 267 D~t--a~~G~~ls~~~-~---------~~~Pi~fig~--Ge~i~Dl~~ 300 (321)
T Consensus 130 D~v~~~~~~~~~~e~~~~ll~~~~~~~~~~pivpiSA~~G~gv~~Ll~ 177 (185)
T pfam00009 130 DRVDDAELDEVVEEISRELLEKYGFGGETIPVIPGSALTGEGIDTLLE 177 (185)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
T ss_conf 277767699999999999888732489988699967899979899999