HHsearch alignment for GI: 254780709 and conserved domain: pfam00009

>pfam00009 GTP_EFTU Elongation factor Tu GTP binding domain. This domain contains a P-loop motif, also found in several other families such as pfam00071, pfam00025 and pfam00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.
Probab=98.11  E-value=5.2e-05  Score=55.48  Aligned_cols=155  Identities=23%  Similarity=0.225  Sum_probs=80.2

Q ss_pred             CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             12311354444424789999999852267426774345124568899999753035321223586612454228999965
Q gi|254780709|r  112 HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQA  191 (321)
Q Consensus       112 ~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~  191 (321)
T Consensus         4 rnVaivG~~n~GKSTL~n~Ll~~~~~i~~~~~~~~~~~~d~~~~E~~------rgiTi-------~~~~~~------~~~   64 (185)
T pfam00009         4 RNIGIIGHVDHGKTTLTDALLYVTGAIDKRGEVKQEGELDRLKEERE------RGITI-------KIAAVS------FET   64 (185)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH------CCEEE-------EEEEEE------EEE
T ss_conf             78999938994499999999715487654643100333365588885------78269-------876999------960


Q ss_pred             HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHH-----HHHHHHHHHHCCCCEEEEECC
Q ss_conf             148759986543332115778999989987630222343011231023352257-----789998764358976999654
Q gi|254780709|r  192 KKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNA-----LRQVEMFHAVAGTTGLIMTKM  266 (321)
Q Consensus       192 ~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~-----~~~a~~F~~~~~~~g~I~TKl  266 (321)
T Consensus        65 ~~~~i~~iDtPG--h~--~f~~~~~---~~l~-----~aD~~vlVvda~~G~~~qt~~~~~~~~~~--~~p-~iv~vNKi  129 (185)
T pfam00009        65 KKRHINIIDTPG--HV--DFTKEMI---RGAA-----QADGAILVVDAVEGVMPQTREHLLLAKQL--GVP-IIVFINKM  129 (185)
T ss_pred             CCCEEEEEECCC--CC--CHHHHHH---HHHH-----HCCCCEEEEECCCCCCCCCHHHHHHHHHH--CCC-EEEEEECC
T ss_conf             893689998998--71--4399999---9986-----46564299986768532309999999982--898-79999773


Q ss_pred             CCC--CCHHHHHHHHH-H---------HCCCEEEEEC--CCCCCCCCC
Q ss_conf             578--70699999999-9---------7698899975--898132555
Q gi|254780709|r  267 DGT--ARGGGLIPIVV-T---------HKIPVYFLGV--GEGINDLEP  300 (321)
Q Consensus       267 D~t--a~~G~~ls~~~-~---------~~~Pi~fig~--Ge~i~Dl~~  300 (321)
T Consensus       130 D~v~~~~~~~~~~e~~~~ll~~~~~~~~~~pivpiSA~~G~gv~~Ll~  177 (185)
T pfam00009       130 DRVDDAELDEVVEEISRELLEKYGFGGETIPVIPGSALTGEGIDTLLE  177 (185)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
T ss_conf             277767699999999999888732489988699967899979899999